Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1146 ATGGGAAGCTCCAAGACAACGGATGGGGCCACAGCTAATTCTGCGACTGAGTCCGACACCAGTAGCAGAACCCACTCCGACAGTGATGTCGCCGACCAATCCGCTTCCTCTCCCTACGCCGAAGGAGAGAAGGTTCTCGCTTATCACAATACTCGAATCTATGAAGCCAAGGTGCTGCAAATCGAATACAAGCTGAAAGAATGGAGCTTTTTTGTTCATTATCTTGGCTGGAATAAAAGTTGGGATGAATGGGTTGGTGTGGATCGTTTGATGAAATACACTGAGGATAATTTACAGAAAAAACTTGCGATTAATGAGAAGCATGGGAATGACAAGACTACAAAAGTAGCCCGAGCCTCACAGTTTAAGTCTAAAAGTTCTAATTCAACAAGAAGCAAGAAGCGTAAGAATGATTCACTTGTTAAGGAAGAAGCTACTCTGCATCATGACAAGCTTGTGAGCGTTCATATTCCTCCAACATTAAAGAAGCAATTAGTTGATGATTGTGAATTTATTACCCATCTGGGCAAGAACCTTAAAAAAGTGCCGTTTAGCACTTCTTTTTCATCGTGGCAATTTGGATGCCAAGAGGCATGCCAGATGCCTGTGTTTGGAACTCTGcttGTCAAACTTCCTCGTAGTCCAAATGTAAATGACATAGTGAAGAAGTATCTTGATTACAGGTTGAAGAAAGATGGCTCGATAGCTGATTCAATTGAAGAAATTTTCAAAGGATTGTGTTGTTACTTTGACAAAGCATTGCCAGTAATGCTCTTGTACAAGAATGAGCGGAAGCAGTATCAAGAAGCATGCCCTGATGATATCAGTCCTTCTACTGTATATGGTGCAGAACATTTGTTACGTCTCTTTGTTAAGTTGCCTGAATTATTGTTCCATGTTAATATTGAAGAGGAGACAAGGATGCAGCTGCAGGCAAAATTGATCGACTTTCTCAAGTTCCTACGGAAAAATCAGAGTACATTTTTCCTCTCGACTTACCATGTTCCAGAAGATAATGAGAACAGCAGCGACTAG 1035 0.4126 MGSSKTTDGATANSATESDTSSRTHSDSDVADQSASSPYAEGEKVLAYHNTRIYEAKVLQIEYKLKEWSFFVHYLGWNKSWDEWVGVDRLMKYTEDNLQKKLAINEKHGNDKTTKVARASQFKSKSSNSTRSKKRKNDSLVKEEATLHHDKLVSVHIPPTLKKQLVDDCEFITHLGKNLKKVPFSTSFSSWQFGCQEACQMPVFGTLLVKLPRSPNVNDIVKKYLDYRLKKDGSIADSIEEIFKGLCCYFDKALPVMLLYKNERKQYQEACPDDISPSTVYGAEHLLRLFVKLPELLFHVNIEEETRMQLQAKLIDFLKFLRKNQSTFFLSTYHVPEDNENSSD 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1146 344 MobiDBLite consensus disorder prediction 1 35 - -
Sto5g1146 344 Pfam MRG 207 333 IPR026541 -
Sto5g1146 344 SUPERFAMILY Chromo domain-like 38 173 IPR016197 -
Sto5g1146 344 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 1 180 IPR008676 GO:0005634|GO:0006325|GO:0006355
Sto5g1146 344 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 207 343 IPR008676 GO:0005634|GO:0006325|GO:0006355
Sto5g1146 344 Pfam RNA binding activity-knot of a chromodomain 41 90 IPR025995 -
Sto5g1146 344 Gene3D - 22 121 - -
Sto5g1146 344 Gene3D MRG domain 148 343 IPR038217 -
Sto5g1146 344 MobiDBLite consensus disorder prediction 107 141 - -
Sto5g1146 344 ProSiteProfiles MRG domain profile. 149 344 IPR026541 -
Sto5g1146 344 PANTHER CHROMATIN-BINDING PROTEIN 1 180 - -
Sto5g1146 344 PANTHER CHROMATIN-BINDING PROTEIN 207 343 - -
Sto5g1146 344 CDD CBD_MSL3_like 43 99 - -
Sto5g1146 344 MobiDBLite consensus disorder prediction 1 39 - -
Sto5g1146 344 PIRSF EAF3_MRG15 205 344 IPR008676 GO:0005634|GO:0006325|GO:0006355
Sto5g1146 344 PIRSF EAF3_MRG15 32 190 IPR008676 GO:0005634|GO:0006325|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1146 Sto-Chr5 7649110 7653406 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1146 K11339 - jre:109020308 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1146 5 7649110 7653406 Sto5g1146 5 7649110 7653406 ECH