Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1130 ATGGATTCCCTTGTCAATAAGAAAAGCCTCATCAATCTCAATCCCTTCCCCAAAACCAGCGACGACGACGACCAGTTTTGCACCACCGCCTACTGTTTCTTCTGCTCCATGAAAGAGGCAGACGTATCCCTTCGCCGATCCCGAATAGCCAACTGCTTCAAACACATACCCCTCACGGACCATCCACAACACGTGTTAGTCCTCAGTGGGCTTTGGACCATCTCTATGGCCCAGCCCAACAACCCCGAGTTCCCCTCCCTCGGCATATTCCACTGTATGGCAACTCTCATCCACAAAGCCATAACCCACCCTCACTGGCTCCTCCACCATCACAACATCTACATCCCCTATTACGCCGCTCACATTATCGGTTCCTTAACTATCAATCAAGAGCACTTCGCACAAATAGCCGTCCAATCAGGCGTCATTCCACCACTCCTCCAACTCCTCAGAGGTCAAATCACCTGGGTCGAGCAACGAGTGGCCGTTAGAGCTCTAGGCCACTTGGCAAGTTATGGCACCACCTTTCAATCCCTCGCAGACTACGGGCAAGAGGTTGTGAATTTGGCCATCAACTTGGCCTCTACTTGTCTCGAACTTGTTTATGTTCAGTTCGTAGGCGTCAAGGATGTGAACAAAAGACTCAAATACCACCGTGAGTTGATGACTAGGGGTATTCATGGGGATTTAGAATTAGAGAATCGCAAGGCAGAGGAGTGGGCTAGCCAGTTACAGTGCTGGTCTCTCCATCTCCTTAATTGCTTTGCTTCCAAGGAGAGGGGCTTGGATGTAATTTGTGCCAACATGGAGTTTCTGGAAGATTTGTGTCACATGTGGGGTGGGTTGGTGAATCAAACCTCACCAGCTGGGGTAGGACTCATTCGAGTCTTGTGCTATACTAAGCTAGGAAGGAAAACCATTGCTCAATCACCAAAAATTATCAAATCTCTCGGGAATCTCTCCAGATCTTCCGATGATTGGCAGTATATGGGGATTCATTGTCTCCTATTGCTCCTCAAGGACGTGGATACGAGGTACAAGGTTTTTGATATTGCCGCTTCTTATCTCATTGATTTGATTGACCTCACGAGTCTTAGAGATAAGTCAAAAGTAGGTGAAGCAATCACAAATGTACTCCTTCTCGAGTATAAGCATAGTAACAAATTGATGAGACTCAACAGACACAAAGTTGATCAGAAACCGTTATTACGACAAGTACTGGATTTGAAGGTGGATAGGTGGAAGAAAGAGAGGGTAATTTCGGAAGAAAAATTGGAAGAGAAAAGGGTTTTGGTGAGTTTGATAAAGCAGCAAGCAAACCATAAGTTGTGCTTGGGAGAGATTGAAGGAGCATTAAGGAAGTACTCGGAAGCACTGGACACGTGTCCGTTGAagtatagaaaagaaagaatggtGCTGTATAGTAAGAGAGCCCAATGTCATCTGTTGCTTAATGACCCAGATCCAGCCATTAGTGACTCGACCCGAGCTCTTTGTCTATCTAACCCGGTGAACACGCACAGAAAAAGCCTTTGGAGGAGGTCACATGCTTATGACATGAAAGGATTAGCCAAAGAGAGCCTGATGGACTACGTAATGTTCATTAATATTACAGGGTGCgccaagtcagatattaatCCCAAGCGTGTCAAGATTCCATACGACGCCGTGCGCATGATCTGCAAACAGATGGAAGCCACGTGGCTGTTCGCCATTCCTCGCTCAAAGGCAGCACAAAAGGAATCTAAAGATAGGCTTTTGTTTGCACAGCAGAGGATCCAGTTTAGGTGGGTGGAGATGATGAAGTGGAAAGGGAAGGTGTGGGATGAGAATGTGAAGAAGAATGAGTTGGTGGCGTTGAAGCTGGAAGAGATTGGTGATTGGTGGTTTGTGGAGGTTATGCTTGGAGGGGAGAGCCTTTGA 1923 0.4607 MDSLVNKKSLINLNPFPKTSDDDDQFCTTAYCFFCSMKEADVSLRRSRIANCFKHIPLTDHPQHVLVLSGLWTISMAQPNNPEFPSLGIFHCMATLIHKAITHPHWLLHHHNIYIPYYAAHIIGSLTINQEHFAQIAVQSGVIPPLLQLLRGQITWVEQRVAVRALGHLASYGTTFQSLADYGQEVVNLAINLASTCLELVYVQFVGVKDVNKRLKYHRELMTRGIHGDLELENRKAEEWASQLQCWSLHLLNCFASKERGLDVICANMEFLEDLCHMWGGLVNQTSPAGVGLIRVLCYTKLGRKTIAQSPKIIKSLGNLSRSSDDWQYMGIHCLLLLLKDVDTRYKVFDIAASYLIDLIDLTSLRDKSKVGEAITNVLLLEYKHSNKLMRLNRHKVDQKPLLRQVLDLKVDRWKKERVISEEKLEEKRVLVSLIKQQANHKLCLGEIEGALRKYSEALDTCPLKYRKERMVLYSKRAQCHLLLNDPDPAISDSTRALCLSNPVNTHRKSLWRRSHAYDMKGLAKESLMDYVMFINITGCAKSDINPKRVKIPYDAVRMICKQMEATWLFAIPRSKAAQKESKDRLLFAQQRIQFRWVEMMKWKGKVWDENVKKNELVALKLEEIGDWWFVEVMLGGESL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1130 640 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 18 585 - -
Sto5g1130 640 Gene3D Tetratricopeptide repeat domain 393 552 IPR011990 GO:0005515
Sto5g1130 640 SUPERFAMILY TPR-like 429 537 IPR011990 GO:0005515
Sto5g1130 640 Gene3D - 46 381 IPR011989 -
Sto5g1130 640 SUPERFAMILY ARM repeat 107 365 IPR016024 -
Sto5g1130 640 SMART arm_5 129 171 IPR000225 GO:0005515
Sto5g1130 640 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 18 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1130 Sto-Chr5 7574908 7578451 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1130 - - gmx:100777591 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1130 5 7574908 7578451 Sto5g1130 5 7574908 7578451 ECH