Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1116 ATGTCGAATCGATATGGTCAGGCCAGGCAAGATAGTAACAAGGGTTTCGTCAAAGCCCAGAAGAAGTTTGTGCCAAAAAGTTCGAATTCAAATGCAAGCGGCTCTAACCCAACTCTCTCAACCTCCCTCAGACAATCGAATTCAAAACAATTGGATACACGTGGTGGGAGCAGTGGTTCCATTCCATCATCAATGGGTAGGGTTCAAATGGGCGGGAATGGAGAATGGGTGTCGAACAGAACCCTGGGTGGGAATTTCGTAAACTACTTGCCACAGGATGAGGCAGTGGCTGCTGGGCTTGGCGCTGAAGAAGGAGGATTGGATCCTGTGGAGTCTCAGAGAGTCGTCGATCTTTTGAATAGAGAGTTGTCTCGTTTGCTCAAATTGAAACCCAGAGAATTTTGGCGTGAAGTGGCTTCTGACACCTCCTTGCATGAGTTTCTAGACAGCTTCCTACAATTTAGAAGCAGATGGTATGATTTCCCACATCGTGGGGCCAAAGGAATACTTGCCGGGGTTATTGTTGGAGAGCTTGAGCTAAGCCGGCGTGTTTTTATGGTATTATATCGCATTTCTTCCAATAAAGATCCAGGTGCTCGGATTGCTGATAGCCTCAGCCTGAGAGACCATGGAGTTCTTTTGCAGGAGAAAAAGCTGCTTGACTTGCCGAAGTTGTTAGATATATGTGCCATATACAGTCATGAAAATGAAGAATTGACAAGAATGCTTGTCAGAAATGCTCTGAATGCTCAGCCTTGGATCAATGATAATCTGACAGCAGTAATATCACATTTTCTCGGAATTGTCCACACAATGCATGAACGTTGCAGTTCATCATTGGAGGTCTTATTTTCTTCAGGAAAACCGGATGACCAAAGTGCCACTCGACTTCAAGCTGATCTGCTTGAGGTGATGGACTTTATAAATGATGCAATTGTATCTATGGATGCTTTCGTTAGTGCATACGAACCAGCAGCTATATGTTTTTCTTGTCCAGTTGAAATAAGTTCTGGGAATGAGGAGCTTCTAAGCCTCCTTGCTAGATTGCATGACTCGCTACTTCCATCCTTGCAAAAGGGTTTCCATATCATTTTTGGTGATGGACAAGATGGAAGAGTGTCTAATATTATTGTAAGTTTGAAGATGTTACGACTGAGATTGGTGAATCTTGGCTGGAAATTGTTGCACTTTTGCTATCTAAGTGATGAAGTGTTCAGAGATGGCTACCCTCTTCCTGCTGCCACAAAAATGTTTCCCGCCAATGTGGAGGATCCAGTTATCAGAGCAGATATTCTGGTTCAAACATTTAGAGAGATCAATGCAGTTTCACTACAATTCCAGGAAAGCCAGCAGAAGGAAACATTTCTTCAGCATGTTGAAAAGAATTACAATATTTTGAAAAGGGTTCAGAGCTTACAAGACAATGGTTGGATATTCATTGATGATGAACAGTTTCAGTATATATCTGGGATTATGAATTTGCTCAAAGAGATTTATAAGGGGCCACAGTCTGCAACAACACCCGTGAAGAGCAAGCCATTGCAGATGGATGAAGATGCTGCAATTTTAGACTCTAAAATCAGTCAAATAAGGGATCTGTTCCCAGATTATGGTAAAGGGTTTTTAGCTGCATGTCTCGAAGTCTATGACCATAATCCAGAAGAGGTAATTCAAAGAATTTTGGAGGGAACCCTCCATGAAGATTTGCAAAGCTTGGACACATCACTAGATGTAGTACCACCAGCTCAGTCTACCACTGTGAACAGGAATGATAAAGGGAAAGGTAAACTAGTAGACTCTATGCCAGTGTCCTCGAATAATGCAGCTGCAGCTGCAGCTAATGGGAAGCAACAAACAGCAGGGCAATTGATTTCCTCCTCATCATCATTTGGAAAATATGTGAGGAAATCTAAAGTTGACTTGCCCGATGCCAGTACTCTGGATAAAAAGGATGAAAAAGATGCTCTAAGAAATGCTGTTCTAGTTTCACAATATGAATATGAAGATGAATATGATGACTCTTTTGATGACTTGGGTCTTAGCGTAGCAGACTCTGGAGTTGAGGAAAATGAGGTATTGGCATTGAGGGATACGTCCGACTCGAAGTCGGGAAAATCATGGTCAACGGATACCAGAGAAACTGCTCAAAATGCTCCTAGTTCAAAATGGGGCTCCAGGAAAAAGCCGCAATACTACGTCAAGGATGGTAAGAATTACAGCTACAAGGTGGCAGGTGCAGTAGCAGTTGCAAATTCAAACGAAGCTGCACTAATTAATCAAGCTCAGCAGGAACTAATATATGGACTTGGACGAGGTGGCAACCGTCCTCTTGGTGCGGTAAAGAAGCTAGAAGATTCCTACAGGGATGATAGCAACCAATTGGAAGTTTCTGAAACAGAAGGGAGAGGGATTTTGGGTCCTGGAAGCAGAGGAAGGAAGGTTGGAGGAAAATCGATGAATACTCATGTTCAGCAGGAGAAACAATCTGATGTCTCTGAAGTGGAAGGAGGAGGTAACGTTCCAAATTccagaggaagaggaaggagggGAGGAGGAAGGAGCAACCATTACAGGAAGGACCGAGCCATGAAGAAGCACTTCTCCGGGTTGAGCGGTTTTTAG 2622 0.4279 MSNRYGQARQDSNKGFVKAQKKFVPKSSNSNASGSNPTLSTSLRQSNSKQLDTRGGSSGSIPSSMGRVQMGGNGEWVSNRTLGGNFVNYLPQDEAVAAGLGAEEGGLDPVESQRVVDLLNRELSRLLKLKPREFWREVASDTSLHEFLDSFLQFRSRWYDFPHRGAKGILAGVIVGELELSRRVFMVLYRISSNKDPGARIADSLSLRDHGVLLQEKKLLDLPKLLDICAIYSHENEELTRMLVRNALNAQPWINDNLTAVISHFLGIVHTMHERCSSSLEVLFSSGKPDDQSATRLQADLLEVMDFINDAIVSMDAFVSAYEPAAICFSCPVEISSGNEELLSLLARLHDSLLPSLQKGFHIIFGDGQDGRVSNIIVSLKMLRLRLVNLGWKLLHFCYLSDEVFRDGYPLPAATKMFPANVEDPVIRADILVQTFREINAVSLQFQESQQKETFLQHVEKNYNILKRVQSLQDNGWIFIDDEQFQYISGIMNLLKEIYKGPQSATTPVKSKPLQMDEDAAILDSKISQIRDLFPDYGKGFLAACLEVYDHNPEEVIQRILEGTLHEDLQSLDTSLDVVPPAQSTTVNRNDKGKGKLVDSMPVSSNNAAAAAANGKQQTAGQLISSSSSFGKYVRKSKVDLPDASTLDKKDEKDALRNAVLVSQYEYEDEYDDSFDDLGLSVADSGVEENEVLALRDTSDSKSGKSWSTDTRETAQNAPSSKWGSRKKPQYYVKDGKNYSYKVAGAVAVANSNEAALINQAQQELIYGLGRGGNRPLGAVKKLEDSYRDDSNQLEVSETEGRGILGPGSRGRKVGGKSMNTHVQQEKQSDVSEVEGGGNVPNSRGRGRRGGGRSNHYRKDRAMKKHFSGLSGF 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1116 873 MobiDBLite consensus disorder prediction 849 863 - -
Sto5g1116 873 MobiDBLite consensus disorder prediction 695 728 - -
Sto5g1116 873 CDD CUE_ASCC2 524 563 IPR041800 -
Sto5g1116 873 ProSiteProfiles CUE domain profile. 522 565 IPR003892 GO:0043130
Sto5g1116 873 SMART cue_7 522 564 IPR003892 GO:0043130
Sto5g1116 873 MobiDBLite consensus disorder prediction 1 74 - -
Sto5g1116 873 MobiDBLite consensus disorder prediction 699 724 - -
Sto5g1116 873 MobiDBLite consensus disorder prediction 818 836 - -
Sto5g1116 873 Coils Coil 780 800 - -
Sto5g1116 873 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 12 872 - -
Sto5g1116 873 MobiDBLite consensus disorder prediction 789 873 - -
Sto5g1116 873 Gene3D - 522 565 - -
Sto5g1116 873 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 12 872 - -
Sto5g1116 873 Pfam CUE domain 524 564 IPR003892 GO:0043130
Sto5g1116 873 SUPERFAMILY UBA-like 522 579 IPR009060 GO:0005515
Sto5g1116 873 MobiDBLite consensus disorder prediction 23 67 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1116 K18667 - gmx:100778129 1156.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1116 5 7507468 7514740 Sto5g1116 5 7507468 7514740 ECH