Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1090 ATGTCATGGTTGGCTCGCTCCCTAGCTAACTCTCTCCGACTCGACGACGATGTACCCAATCGCCCACGCGACCTACCAACAACTTCACCCAAAAACCACGAATATCCTCATCTGCAACACCATCATCCTCACCAACCGCACCAACCGCAAGATGATGAACTTGAATTAGACCATGAAGCGCAAGCTCGAGGAGTCAGAGAGGATCTTAACGAATTCAAGCAAACCCTAACCCGCCAATTTTGGGGAATGGCCTCCTTCCTAGCTCCGCCACCAACAAACTCCCATCAGTCTCCTCCATCTGAGCACCACTGCCGTTCTGATCTGGCTACCTTTGCTGAGAATCAATCAGAGCCGTCTGATCAGTGTGTTTCTGGAAATGGTGAAGAGGAGTCTGTTGAGAATGAGGAATCGGACACGGAGGAGTGTGATCTTAATCGCGCAGTTGGAATTACAGAAGAGGTGTTGACCTTCGCAAGAAATATAGCGATGCACCCCGAGACCTGGCTAGATTTCCCTATTGACGAGGAAGAAGACACGGATGATCTTGACATGTCCGATGCTCAACTGGTGCATGCTTTGGTCATAGAAAGACTTGCTCCTAGATTAGCTGCACTCAGAATTGAGCTATGTCCTTGCCATATGAGTGAAGGTTATTTTTGGAAAGTCTATTTTGTACTTCTGCATTCCAGACTCAATAAGCAAGATGCAGAGGTTTTATCTACCCCCCAGGTTATGGCAGCCAGAGCAATGTGGATGCAGGAGTTGCAGAAGCAAATGAAGCCTGAATCTGAATGGTTTGAAAGAAGCACTTCCTATATGAGAGACACTGCTCAACATGAGGATTTTGCTTCCAGAATATTAGATTATGCCATGGCTCATGGCACACATGGATGTGAACCGACCACTTGGCCTGCAATAGCAGATTATGAGACTGAGAAACACACTATTGAAAGTTCTGAAACAATTTTCATTGATAAGACCGTCATTGAGGAAGAAACTATTCTTAAAACTGAGGATAAGGATCTTGGAATTGTTAGATCCTCAAAAATTGTTCTTCCAGATTAtgaagatgatgaggatgaaTGGCCAGAGGAAGATTCTGAATTGGGGGTAACCACCATGCCTGTGGTGAATGAAGACGACATATCTTTCAGTGATCTCGAAGATGATGATTATGGCATAAAACCAGTTAAACCCGTAACTGAATCCAAGACAGTATGA 1221 0.4447 MSWLARSLANSLRLDDDVPNRPRDLPTTSPKNHEYPHLQHHHPHQPHQPQDDELELDHEAQARGVREDLNEFKQTLTRQFWGMASFLAPPPTNSHQSPPSEHHCRSDLATFAENQSEPSDQCVSGNGEEESVENEESDTEECDLNRAVGITEEVLTFARNIAMHPETWLDFPIDEEEDTDDLDMSDAQLVHALVIERLAPRLAALRIELCPCHMSEGYFWKVYFVLLHSRLNKQDAEVLSTPQVMAARAMWMQELQKQMKPESEWFERSTSYMRDTAQHEDFASRILDYAMAHGTHGCEPTTWPAIADYETEKHTIESSETIFIDKTVIEEETILKTEDKDLGIVRSSKIVLPDYEDDEDEWPEEDSELGVTTMPVVNEDDISFSDLEDDDYGIKPVKPVTESKTV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1090 406 MobiDBLite consensus disorder prediction 380 406 - -
Sto5g1090 406 SUPERFAMILY BSD domain-like 149 236 IPR035925 -
Sto5g1090 406 MobiDBLite consensus disorder prediction 16 53 - -
Sto5g1090 406 MobiDBLite consensus disorder prediction 114 142 - -
Sto5g1090 406 ProSiteProfiles BSD domain profile. 176 231 IPR005607 -
Sto5g1090 406 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 404 - -
Sto5g1090 406 MobiDBLite consensus disorder prediction 14 53 - -
Sto5g1090 406 MobiDBLite consensus disorder prediction 114 128 - -
Sto5g1090 406 Pfam BSD domain 179 235 IPR005607 -
Sto5g1090 406 Gene3D BSD domain 145 241 IPR035925 -
Sto5g1090 406 SMART wurzfinal6 179 231 IPR005607 -
Sto5g1090 406 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1090 Sto-Chr5 7330704 7334460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1090 147 229 EF-hand Containing Proteins AT1G69030 31.183 4.26e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1090 - - gmx:100794286 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1090 5 7330704 7334460 Sto5g1090 5 7330704 7334460 ECH