Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1056 ATGGCTTCCGCCTCTTCTGCTCCTTCGTATCTGACAGACGTTCCTCTACATCACTCTGGTGAGAAGCCTCCGGATCATGAAGATCGTTCAACTTCGGTTCCTATTCATATTGTCACCCAGGCATCTCAACTTCCTGTAGATTTCCTCGAGCCCTCCCCTGATAAGCAGCTCGTTATTGGTTTCGATTGTGAGGGTGTTGACTTATGTCGCACTGGAGCTCTATGTGTAATGCAGCTTGCATTTCCGGATGCTATATACCTGGTTGATGCAATTGAAGGGGGACAGATGCTTATGAAAGCCTGCAAGCCTGCACTGGAGTCAACTTACATCACAAAAGTGATTCATGATTGCAAACGAGATAGTGAGGCATTGTATTTTCAATTCGGCATCAAGTTGAACAATGTGGTGGATACCCAGGGTTTGGATGTAGGTATATCATATGTGGAGAAAGAAGAAGTTCGCGTCCTCCTTCGAAAGGACCCCAAGTTTTGGACATACAGACCACTATCTGAATTAATGGTCCGCGCAGCTGCTGATGATGTTCGCTTTCTTCTATACATttatcagaggatgatggaaaAATTAAACGAACGGACTCTATGGTATCTTGCTGTTCGTGGTGCCCTGTATTGCCGATGCTTTTGTGTCAATAGTGATGATCACTCTGATTGGCCATCTCTACCTCCTTTTCCAGATAAGTTGAAAGTGGATGGAAATGTTCCTGAGGAAGAAATCCTTTCAGTTCTTGATGTTCCCCGAGGACAGATGGGACGTGTTATTGGGAGAAGAGGGTCTTCAATCATGTCAATTAAGGAGTCCTGCAATGCGGAAATTCTCATTGGGGATCTCAAGGGCCCACCTGACAAGgTTTTTATTATGGGACCAGTGAAGCAGGTGAGAAAAGCAAAAGCCATGCTGAGGGGTAGAATGGTGGATATGTACTGA 945 0.4434 MASASSAPSYLTDVPLHHSGEKPPDHEDRSTSVPIHIVTQASQLPVDFLEPSPDKQLVIGFDCEGVDLCRTGALCVMQLAFPDAIYLVDAIEGGQMLMKACKPALESTYITKVIHDCKRDSEALYFQFGIKLNNVVDTQGLDVGISYVEKEEVRVLLRKDPKFWTYRPLSELMVRAAADDVRFLLYIYQRMMEKLNERTLWYLAVRGALYCRCFCVNSDDHSDWPSLPPFPDKLKVDGNVPEEEILSVLDVPRGQMGRVIGRRGSSIMSIKESCNAEILIGDLKGPPDKVFIMGPVKQVRKAKAMLRGRMVDMY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1056 314 PANTHER EGALITARIAN, ISOFORM B 11 139 - -
Sto5g1056 314 PANTHER EGALITARIAN, ISOFORM B 143 310 - -
Sto5g1056 314 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 241 311 IPR036612 GO:0003723
Sto5g1056 314 SUPERFAMILY Ribonuclease H-like 30 227 IPR012337 -
Sto5g1056 314 SMART 35exoneu6 35 196 IPR002562 GO:0003676|GO:0006139|GO:0008408
Sto5g1056 314 CDD KH-I 249 306 - -
Sto5g1056 314 PANTHER - 143 310 - -
Sto5g1056 314 PANTHER - 11 139 - -
Sto5g1056 314 ProSiteProfiles Type-1 KH domain profile. 244 306 - -
Sto5g1056 314 MobiDBLite consensus disorder prediction 1 31 - -
Sto5g1056 314 Pfam 3'-5' exonuclease 47 195 IPR002562 GO:0003676|GO:0006139|GO:0008408
Sto5g1056 314 Gene3D K Homology domain, type 1 234 311 IPR036612 GO:0003723
Sto5g1056 314 Pfam KH domain 249 307 IPR004088 GO:0003723
Sto5g1056 314 CDD Egl_like_exo 47 215 - -
Sto5g1056 314 SMART kh_6 243 311 IPR004087 GO:0003676
Sto5g1056 314 Gene3D - 5 206 IPR036397 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1056 K18740 - qsu:112003874 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1056 5 7092418 7096065 Sto5g1056 5 7092418 7096065 ECH