Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1049 ATGAAGAGGTTCTCTGCCTGCTGCTTCACAAGCAGAGTCTCCAAATCCCACTCTCACTCCAAGCCAAATCATCCTCAGATCATGATGGGAAACGTCTCTAGTCCAAGTAAGAGCAGGGCtactaatattataataaaccATGACTTTTCTGGAGGGCTGGACTCTTGGCATCCCAATTTCTGCCAAGGCTATGTAGTTTCAGCTAAATCAGGTTCTCAAGGAAAGATGTCAATGGTGTCAAAGAGTAATTATGCTGTTGTCACCGACCGTAAGGAATGCTGGCAAGGACTTGAACAAGATATCACAGACAAAATTTCCACTGGTTCCACTTACGAGGTTTCAGCTTGTGTTGGAGTATGTGGGCTTCCTCAGGGATCTGCTGATGTTCTAGCTACTCTAAAACTAGAATATCGAGATTCAGCTACTAGTTACTTGTTCATTGGGAGAACTTCTGCCATAGAAGCCAGCTGGGCAAAGGTGAAAGGGAAATTTTCCTTGTCAACAATGCCTGACCGGGTTGTATTTTATCTGGAAGGGCCTGCACCTGGAGTTGACTTGCTCATACAATCAGTAGAGATCATCTGTTCCAATCAAAATGATCACAATTCTGCAAGCACTGATTGTGATGCGCCTGGAGATGACAACATTATTATAAACCCAACATTTGATGATGGCCTGAATAATTGGTCTGGACGAGGCTGCAAGATTGCTTTGCATAACTCCATGGCAGATGGGAAAATTCTCCCTCAGACTGGGAAAGTCTTTGCATCTGCAACAGAACGCACACAAAGCTGGAATGGAATTCAACAAGAGATCACTGGAAGAGTGCAGCGCAAGCTCGCCTATGAGGTTACGGCTTTGGTTCGGATATATGGCAACAATGTCACTTCTGCTGATGTACGAGCTACTTTGTGGGTCCAAACACCAGATCTTCGAGAGCAGTATATAGGCATAGCCAATGTGCAGGCAACAGATAAAGATTGGGTTCAAATGCAGGGAAAATTCCTTCTAAATGGTTCCCAATCAAAAGTGGTCGTCTATCTAGAAGGTCCCCCTCCAGGCACTGAAATTCTTGTCAATACTTTGGTTTTGAAGCATGCAGCTAAAACTCCTCCATCAACACCACCAGATTTTCAGAATGCTCCTTTTGGGATTAATGTAATTGAGAACAGCAATCTGGCTGATGGTACGAAGGGATGGTTTCCCCTTGGCAATTGTACTTTAAGTGTTGGAACTGGTTCACCACATATAATTCCATCGATGGCCAGAGACTCCCTTGGTCTTCATGAACCCTTAAGTGGACGTTACATCCTCGTGTCCAATCGCACGCAGACATGGATGGGTCCTGCTCAGATTATAACTGACAAATTAAAACTCTTTTTGACTTATCAAGTATCTGCTTGGGTCCGGATTGGTTCAGGATCAAGTGGTCCACAGAACGTTAATGTTGCCCTTGGTGTTGACGACCAGTGGGTCAATGGCGGACAAGTTGAGGTTGCGGATGACCGATGGCATGAAATTGGTGGGTCCTTTAGAATTGAGAAGCAACCATCAAAGGTTATGGTTTATATCCAAGGTCCTGCTTCTGGTGTAGACTTAATGGTTGCTGGACTTCAGATCTTCCCTGTTGATAGACAAGCAAGGTTTAGACATTTAAGGAAGCAAACAGATAAGGTCCGTAAGCGTGATGTTATCCTGAAATTCTCAGGACTGGACACAAGCAGCTATCTCGGAaccttggtgaaagttagacAAACACAGAACAACTTTCCTATCGGATCGTGTGTCAACAGAACAAATATTGACAATGAAGATTTTGTTGACTTCTTTGTGAAACATTTTAATTGGGCCGTGTTTGGCAATGAGTTGAAGTGGTATTGGACAGAGCCACAACAAGGGAATTTCAACTATAAGGATGCTGATGATATGTTAGCCTTGTGTGTGAAGAACAAGATAGAGACCCGTGGACATTGCATCTTCTGGGATGTGGATGGCACAGTTCAACAATGGATTAAATCACTGGGTAAAGATGATTTGATGAAGGCTGTCCAGAATCGCTTAAACGGCCTTCTAACTCGCTACAAGGGCAAGTTCAGGCACTACGATGTTAATAATGAAATGATGCACGGTTCATTTTATCAAGATAGACTAGGTAAAGATATCAGGTCTAACATGTTCAAGACTGCACACCAACTAGACCCTTCGGCCACCTTGTTTGTAAATGACTATCATGTTGAAGATGGGTGTGACACCAGATCATCCCCAGAAAAATACATTCAACATGTTCTTGATTTGCAAGAGCAAGGCGCACCTGTTGGGGGAATGGGTATTCAAGGTCACATAGACAGTCCGGTGGGACCTATTGTCTCTTCTGCCCTTGATAAATTGGGTATTCTTGGTTTACCAATCTGGTTTACAGAGCTTGATGTATCTTCCACTAATGAATATGTGAGAGCAGATGATTTGGAAGTTATGATGAGGGAAGCTTTTGCTCACCCTACAGTGGAGGGTATAATGCTGTGGGGATTCTGGGAACTATTCATGAGCCGTAATGACTCACATTTGGTGAACGCAGAAGGTGACATCAATGAAGCTGGCAAAAGATTCCTTGCACTAAAGCAAGAGTGGCTTTCTCACAGTCATGGACATGTTGATGAACAGGGGCAATTTAGTTTCAGAGGTTTTCATGGAACATACAATGTGGAAGTTGTCACCTTATCAAAGAAGATTTCCAAGACATTTGTTGTCGACCAGGGTGATTCCCCACTAGTGGTGTCCGTAGATTTATAA 2790 0.4305 MKRFSACCFTSRVSKSHSHSKPNHPQIMMGNVSSPSKSRATNIIINHDFSGGLDSWHPNFCQGYVVSAKSGSQGKMSMVSKSNYAVVTDRKECWQGLEQDITDKISTGSTYEVSACVGVCGLPQGSADVLATLKLEYRDSATSYLFIGRTSAIEASWAKVKGKFSLSTMPDRVVFYLEGPAPGVDLLIQSVEIICSNQNDHNSASTDCDAPGDDNIIINPTFDDGLNNWSGRGCKIALHNSMADGKILPQTGKVFASATERTQSWNGIQQEITGRVQRKLAYEVTALVRIYGNNVTSADVRATLWVQTPDLREQYIGIANVQATDKDWVQMQGKFLLNGSQSKVVVYLEGPPPGTEILVNTLVLKHAAKTPPSTPPDFQNAPFGINVIENSNLADGTKGWFPLGNCTLSVGTGSPHIIPSMARDSLGLHEPLSGRYILVSNRTQTWMGPAQIITDKLKLFLTYQVSAWVRIGSGSSGPQNVNVALGVDDQWVNGGQVEVADDRWHEIGGSFRIEKQPSKVMVYIQGPASGVDLMVAGLQIFPVDRQARFRHLRKQTDKVRKRDVILKFSGLDTSSYLGTLVKVRQTQNNFPIGSCVNRTNIDNEDFVDFFVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDMLALCVKNKIETRGHCIFWDVDGTVQQWIKSLGKDDLMKAVQNRLNGLLTRYKGKFRHYDVNNEMMHGSFYQDRLGKDIRSNMFKTAHQLDPSATLFVNDYHVEDGCDTRSSPEKYIQHVLDLQEQGAPVGGMGIQGHIDSPVGPIVSSALDKLGILGLPIWFTELDVSSTNEYVRADDLEVMMREAFAHPTVEGIMLWGFWELFMSRNDSHLVNAEGDINEAGKRFLALKQEWLSHSHGHVDEQGQFSFRGFHGTYNVEVVTLSKKISKTFVVDQGDSPLVVSVDL 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1049 929 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 574 872 IPR001000 GO:0004553|GO:0005975
Sto5g1049 929 SUPERFAMILY Galactose-binding domain-like 384 544 IPR008979 -
Sto5g1049 929 SUPERFAMILY (Trans)glycosidases 580 880 IPR017853 -
Sto5g1049 929 SUPERFAMILY Galactose-binding domain-like 213 367 IPR008979 -
Sto5g1049 929 SUPERFAMILY Galactose-binding domain-like 41 197 IPR008979 -
Sto5g1049 929 Pfam Glycosyl hydrolase family 10 586 843 IPR001000 GO:0004553|GO:0005975
Sto5g1049 929 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 800 810 IPR031158 -
Sto5g1049 929 Gene3D - 209 367 - -
Sto5g1049 929 Gene3D - 36 194 - -
Sto5g1049 929 Gene3D - 383 541 - -
Sto5g1049 929 Pfam Carbohydrate binding domain 386 529 IPR003305 GO:0016798
Sto5g1049 929 Pfam Carbohydrate binding domain 214 351 IPR003305 GO:0016798
Sto5g1049 929 Pfam Carbohydrate binding domain 42 182 IPR003305 GO:0016798
Sto5g1049 929 SMART glyco_10 623 873 IPR001000 GO:0004553|GO:0005975
Sto5g1049 929 PANTHER GLYCOSYL HYDROLASE 41 191 IPR044846 GO:0004553|GO:0005975
Sto5g1049 929 PANTHER GLYCOSYL HYDROLASE 205 929 IPR044846 GO:0004553|GO:0005975
Sto5g1049 929 PANTHER - 205 929 - -
Sto5g1049 929 PANTHER - 41 191 - -
Sto5g1049 929 MobiDBLite consensus disorder prediction 14 33 - -
Sto5g1049 929 Gene3D Glycosidases 577 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1049 Sto-Chr5 7049882 7055464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1049 1 929 Glycoside Hydrolase AT1G58370 66.420 0.0 1342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1049 - - gmx:100816678 1583.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1049 5 7049882 7055464 Sto5g1049 5 7049882 7055464 ECH