Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1038 atgaattttattcCTAGTATCATAATCGACTCAACGGCGAATGTCCCTAGGTCGGTTATTTACTTGTTGTTCACCGTCGTTACCGTCAAAGTTTCTCACTCTCTCTACAGATATTTTCACCGAAATTATAGATTTCCCTCTATGTCTTCTTCTTCAGCAAACACCGACGAGGCTCTCCGGCGCGGCCGTATACTCTCAAGCAACCTCTATTTCGATGTACCCGTGTCCAAGGTTCCACTTATCTACTCGAAGTCGTACGACATAGCGTTTCTGGGCATAGAGAAACTGCACCCGTTTGATTCATCTAAATGGGGACGCATTTGTCAACTCCTCATTTCATTTGGAATGCTAGACAAAAATTGCATTGTGGAGCCTCTGGAAGCTTCGAAGGATGATCTTCTAGTGGTACATTCAGAATCATACTTGAATAGCTTAAAGAACAGTACAAATGTTGCTAGGATAATTGAGGTCCCCCCTGTGGCAATATTTCCCAATTGTCTTCTGGAGTGTAAAGTTCTTTCCCCATTCCGTAAGCAGGTTGGAGGGACTATATTGGCAGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTAGGTGGAGGTTTCCATCATTGTTCAGCACAGCAAGGAGGTGGATTTTGTGCGTATGCAGATATTTCTCTATGCATTCACTTTGCTTTTGTTCGGTTGAACATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAATGGCCATGAAATGGACTTTGCCAATGACAGCCAAGTCTATATCCTGGATATGTACAATCCTGGAATATATCCTCTTGATTTTGAGGCCAGGAGGTACATAGATCAGATAGTTGAAgtgaagAGTGGGACACCAACAGAGGATTACCTGCAGAAATTAGACAAAGCGCTTGAGGCATTAGGAACTTTCAAGTCTCCAGGTTTGACCCCGACATACAAGAAAATTGATATTACAGAAGgaaatTGTTTGACGACGGTAGTCATATCTTGCAATGTGATGACGAGTacacgtgataaaaaATTCGAGTTCCTTTTACCTTCTAACATTTATCTTGTCTTTCTCCTGTTCATACCAGCATCTGCAGATGCGGGAAGCTTCAACAACAGTGTAGCAGAACAACAGGTTGGTTCTGGTACCATGATCCGTGAGATAAATGTGAAATCAAATACTTTGAGTTTATATGATGTATCGAGCATTTGTGTCCTTGCTCTGCTTTAA 1236 0.4102 MNFIPSIIIDSTANVPRSVIYLLFTVVTVKVSHSLYRYFHRNYRFPSMSSSSANTDEALRRGRILSSNLYFDVPVSKVPLIYSKSYDIAFLGIEKLHPFDSSKWGRICQLLISFGMLDKNCIVEPLEASKDDLLVVHSESYLNSLKNSTNVARIIEVPPVAIFPNCLLECKVLSPFRKQVGGTILAAKLAKERGWAINVGGGFHHCSAQQGGGFCAYADISLCIHFAFVRLNISRVMIIDLDAHQGNGHEMDFANDSQVYILDMYNPGIYPLDFEARRYIDQIVEVKSGTPTEDYLQKLDKALEALGTFKSPGLTPTYKKIDITEGNCLTTVVISCNVMTSTRDKKFEFLLPSNIYLVFLLFIPASADAGSFNNSVAEQQVGSGTMIREINVKSNTLSLYDVSSICVLALL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1038 411 PRINTS Histone deacetylase superfamily signature 201 224 IPR000286 -
Sto5g1038 411 PRINTS Histone deacetylase superfamily signature 235 250 IPR000286 -
Sto5g1038 411 PANTHER HISTONE DEACETYLASE 11 48 361 - -
Sto5g1038 411 Pfam Histone deacetylase domain 97 274 IPR023801 -
Sto5g1038 411 PANTHER HISTONE DEACETYLASE 11 48 361 - -
Sto5g1038 411 Gene3D Histone deacetylase domain 77 314 IPR037138 -
Sto5g1038 411 SUPERFAMILY Arginase/deacetylase 77 332 IPR023696 -
Sto5g1038 411 CDD HDAC_classIV 97 314 IPR044150 GO:0004407|GO:0016575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1038 K11418 - gmx:100781276 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1038 5 6965317 6972932 Sto5g1038 5 6965317 6972932 ECH