Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1037 ATGCCGAAATTCCTTGCAGCCAACAGAAGAAACAATCACATGACAAACAATTGTGCGCATGTTTTTGATCTTTTTGACGAAAAGAGAAATGGTGTTATCGAGTTTGAGGAATTTGTCCATGCACTCAATGTTTTCCATCCTAATGCTCCTGTTGAAGAAAAAATCGATTTTGCATTTAGGCTGTACGATCTGAGGCAAACTGGGTATATTGAGAGAGAAGAAGTCAAACAAATGGTTATAGCAATCTTGATGGAATCTGACACGAATCTGTCAGATGACCTTCTTGAAGCTATAGTTGACAAGACATTTGCTGATGCTGATAAAGACAATGATGGTAGAATAAGTAAAGAAGACTGGAAGGATTTTGTGAGTCGAAATCCATCCCTGTTGAAGAACATGACACTTCCATATCTGAAGGATATCACCACTCTGTTTCCGAGTTTTATTTTTGACAGTGAGGTTGAAACTTGA 471 0.38 MPKFLAANRRNNHMTNNCAHVFDLFDEKRNGVIEFEEFVHALNVFHPNAPVEEKIDFAFRLYDLRQTGYIEREEVKQMVIAILMESDTNLSDDLLEAIVDKTFADADKDNDGRISKEDWKDFVSRNPSLLKNMTLPYLKDITTLFPSFIFDSEVET 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1037 156 CDD EFh 18 79 IPR002048 GO:0005509
Sto5g1037 156 PRINTS Recoverin family signature 21 42 - -
Sto5g1037 156 PRINTS Recoverin family signature 68 86 - -
Sto5g1037 156 PRINTS Recoverin family signature 114 134 - -
Sto5g1037 156 ProSiteProfiles EF-hand calcium-binding domain profile. 50 85 IPR002048 GO:0005509
Sto5g1037 156 SUPERFAMILY EF-hand 12 148 IPR011992 -
Sto5g1037 156 Pfam EF-hand domain pair 52 122 IPR002048 GO:0005509
Sto5g1037 156 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Sto5g1037 156 Gene3D - 3 156 - -
Sto5g1037 156 PANTHER CALCINEURIN B 19 155 IPR045198 GO:0005509|GO:0019722|GO:0019900
Sto5g1037 156 Pfam EF-hand domain pair 17 41 IPR002048 GO:0005509
Sto5g1037 156 ProSiteProfiles EF-hand calcium-binding domain profile. 13 48 IPR002048 GO:0005509
Sto5g1037 156 PANTHER CALCINEURIN B-LIKE PROTEIN 10 19 155 - -
Sto5g1037 156 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
Sto5g1037 156 SMART efh_1 98 126 IPR002048 GO:0005509
Sto5g1037 156 SMART efh_1 17 45 IPR002048 GO:0005509
Sto5g1037 156 SMART efh_1 54 82 IPR002048 GO:0005509
Sto5g1037 156 CDD EFh 54 124 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1037 Sto-Chr5 6957564 6958601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1037 19 155 EF-hand Containing Proteins AT4G26570 67.153 1.73e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1037 K06268 - egr:104436294 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1037 5 6957564 6958601 Sto5g1037 5 6957564 6958601 ECH