Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1034 ATGGAACGTGCGCGTCGGATCGCAAACAGGGCCATTCTGAAACGCCTCGTTTCACAGGCGAAGCAGTCCCGCCAGAATGAATCCGCTCTGTGCTCCTCCACCCCTTTATTGTACACACCTTCGAGGTACGTGTCGTCTCTTTCTCCCTCTGCTTTCAGAGGCAGGAATGTCGGTTTCTTGGGTGTTGGGTCCCAAACTCGATCTATTTCGGTCGAGGCACTCAAACCCAGCGACACTTTTCCTCGTCGCCATAACTCTGCGACCCCTGAGGAACAGAGCAAGATGGCTCAAACATGCGGGTTCGATAACCTGGACTCGCTTATTGATGCCACCGTGCCTAAATCGATCCGGTTGAATGATATGAAGTTTAGCAAGTTCGATGAAGGGTTGACGGAGAGCCAAATGATTGAGCACATGCAGTATCTGGCTTCTAAGAACAAAATCTTCAAGTCTTACATTGGGATGGGGTACTACAACACCCATGTTCCTCCTGCGATTTTGAGGAACATAATGGAAAACCCAGCTTGGTACACACAGTACACTCCTTACCAGGCTGAGATATCCCAAGGACGTCTCGAGTCTTTGCTTAATTTTCAGACAATGATCACCGATCTCACTGGTCTACCCATGTCTAATGCTTCCTTGCTAGATGAAGGAACTGCTGCTGCTGAGGCAATGGCTATGTGTAAcaacattttgaagggaaagaagaagacTTTTATTATTGCCACTAACTGTCATCCTCAGACCATTGATATTTGCAAGACAAGAGCCGATGGTTTTGATCTTAAGGTTGTCACATCAGATCTCAAGGATATTGATTACAAATCTGGTGATGTGTGTGGTGTGCTTGTTCAGTACCCTGGTACTGAGGGAGAGGTTTTGGATTATGGGGAGTTTATTAAGAATGCTCATGCTCATGGAGTTAAGGTTGTTATGGCTTCGGATCTCTTGGCTTTGACTGTGTTGAAGCCTCCTGGTGAGTTGGGAGCAGACATTGTTGTTGGTTCAGCTCAAAGGTTTGGAGTTCCAATGGGTTATGGAGGCCCTCATGCCGCATTCCTCGCCACGTCTCAAGAGTACAAGAGGATGATGCCTGGAAGAATCATTGGTGTCAGTGTTGATTCTACTGGAAAGCCAGCCTTGAGAATGGCAATGCAAACTAGGGAGCAGCATATTCGTAGAGACAAGGCTACTAGCAATATTTGTACTGCTCAGGCACTGCTTGCAAACATGGCTGCTATGTATGCTGTTTATCATGGACCTGAAGGCCTTAAAACCATCGCTCAACGTGTTCATGGTCTAGCCGGGGTATTTGCTCTCGGATTAAAGAAACTTGGAACTGTGGAAGTTCAGGATCTTCCCTTCTTTGACACTGTAAAGGTTAAGGTTGCCAATGGCCATGCAATTGCTGATGCTGCttacaaaagtgaaataaatttGCGAGTTGTAGATGGAAACACTATCACTGTTTCCTTTGATGAAACAACCACCTTGGAGGATGTTGATAAACTTTTCAAAGTTTTTGCTGGCGGCAAGCCTGTGTCTTTCACTGCTGCATCTCTTGCCCCAGAGGTTCAGAGTGCAGTTCCTTCTGGACTAACTAGGCAGACCCCTTATCTGACACACCCTATCTTTAACACGTACCACACTGAACACGAGTTGCTCAGGTACATTCATCGGCTACAGTCAAAGGATCTTTCACTGTGCCACAGTATGATCCCACTAGGATCTTGTACGATGAAGCTGAATGCCACAACTGAAATGATGCCTGTGACATGGCCCAGCTTTACTGACATTCACCCTTTTGCACCCACTGAACAGGCTCAAGGTTATCAGGAAATGTTTGAAAATTTGGGTGATCTATTGTGTACTATCACTGGGTTTGACTCCTTCTCTCTACAACCTAATGCTGGTGCAGCCGGAGAATATGCTGGACTGATGGTTATCCGTGCATATCATGCAGCAAGGGGAGAGCCCCACCGCAATGTTTGCATCATACCAGTTTCAGCACATGGTACAAATCCAGCCAGTGCTGCTATGTGTGGAATGAAAATTGTCCCTGTTGGAACTGATTCCAAGGGAAATATCAATATTCCAGAGTTGAAAAAGGCCGCTGAAGCAAACAAGGACAACTTATCTGCACTTATGGTGACATATCCTTCAACCCATGGTGTTTACGAGGAAGGCATTGATGAGATATGCAAGATTATTCATGACAACGGAGGCCAAGTTTATATGGATGGAGCTAACATGAATGCACAGGTAGGACTTACAAGCCCAGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCACAAGACATTTTGCATCCCACATGGAGGAGGTGGTCCTGGCATGGGTCCTATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCCCATCCAGTGGTACCCACCGGTGGCATTCCCGCCCCCGAGAAGTCTCAACCACTTGGTACCATTGCTGCAGCACCTTGGGGCTCAGCTCTCATATTACCAATCTCTTATACTTACATAGCCATGATGGGATCCCATGGACTAACCCAAGCATCTAAGATTGCCATTTTGAATGCTAACTACATGGCCAAACGATTGGagAATCATTATCCCGTTCTTTTCCGTGGAGTGAATGGAACATGTGCTCATGAATTCATTATTGACTTAAGAGGCTTTAAGAATACCGCTGGGATAGAAGCTGAAGATGTGGCTAAGCGTCTTATGGACTATGGATTTCATGGACCAACAATGTCATGGCCTGTGCCTGGCACCCTCATGATTGAACCCACTGAAAGTGAAAGCAagGCTGAGTTAGACAGGTTTTGTGATGCTCTAATCTCGATTCGAGAAGAAATTGCAGAGATTGAGAACGGGAAAGCTGATATTAACAACAATGTACTCAAGGGAGCCCCTCACCCACCTTCATTGCTAATGGGAGATGAATGGACAAAACCATACTCTCGAGCATATGCAGCATACCCAGCTCCCTGGCTCCGTGTGGCCAAGTTCTGGCCTACCACAGGACGTGTGGACAATGTGTACGGCGACCGCCACCTCATCTGCACCCTCCTCTCGGTGTCGCAGGCGGCTGAGGAACAAGCTGCTGCCTCTGCATAG 3123 0.4627 MERARRIANRAILKRLVSQAKQSRQNESALCSSTPLLYTPSRYVSSLSPSAFRGRNVGFLGVGSQTRSISVEALKPSDTFPRRHNSATPEEQSKMAQTCGFDNLDSLIDATVPKSIRLNDMKFSKFDEGLTESQMIEHMQYLASKNKIFKSYIGMGYYNTHVPPAILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKTFIIATNCHPQTIDICKTRADGFDLKVVTSDLKDIDYKSGDVCGVLVQYPGTEGEVLDYGEFIKNAHAHGVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSTGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGTVEVQDLPFFDTVKVKVANGHAIADAAYKSEINLRVVDGNTITVSFDETTTLEDVDKLFKVFAGGKPVSFTAASLAPEVQSAVPSGLTRQTPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFENLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHAARGEPHRNVCIIPVSAHGTNPASAAMCGMKIVPVGTDSKGNINIPELKKAAEANKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSHGLTQASKIAILNANYMAKRLENHYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEAEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIENGKADINNNVLKGAPHPPSLLMGDEWTKPYSRAYAAYPAPWLRVAKFWPTTGRVDNVYGDRHLICTLLSVSQAAEEQAAASA 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1034 1040 TIGRFAM gcvP: glycine dehydrogenase 83 1024 IPR003437 GO:0004375|GO:0006544
Sto5g1034 1040 Gene3D Aspartate Aminotransferase, domain 1 152 505 IPR015422 GO:0003824
Sto5g1034 1040 SUPERFAMILY PLP-dependent transferases 83 509 IPR015424 -
Sto5g1034 1040 CDD GDC-P 132 509 IPR020581 GO:0004375|GO:0006546
Sto5g1034 1040 Coils Coil 947 967 - -
Sto5g1034 1040 Pfam Glycine cleavage system P-protein 526 802 IPR020581 GO:0004375|GO:0006546
Sto5g1034 1040 Pfam Glycine cleavage system P-protein 83 509 IPR020581 GO:0004375|GO:0006546
Sto5g1034 1040 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1040 - -
Sto5g1034 1040 SUPERFAMILY PLP-dependent transferases 530 1025 IPR015424 -
Sto5g1034 1040 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 74 1031 IPR003437 GO:0004375|GO:0006544
Sto5g1034 1040 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1040 IPR020581 GO:0004375|GO:0006546
Sto5g1034 1040 Gene3D - 591 821 IPR015421 GO:0003824
Sto5g1034 1040 Gene3D - 163 423 IPR015421 GO:0003824
Sto5g1034 1040 Gene3D Aspartate Aminotransferase, domain 1 839 978 IPR015422 GO:0003824
Sto5g1034 1040 CDD GDC-P 552 947 IPR020581 GO:0004375|GO:0006546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1034 Sto-Chr5 6933242 6937998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1034 K00281 - jre:109009676 1872.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1034 5 6933242 6937998 Sto9g3446 9 33913378 33915391 CCT