Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1019 ATGAATTCTTCACAAGAGCCTACGTTGTCAGCAAACGTAGCAGGTTTAATGGATAATGCATCACTTCAGAGGGAGAAATCCAGTTTGGATGCTATGCCTGTATATGTCAAGGAGCTAATTGCCGGTGGGTTTGCTGGTGCACTTTCTAAGACTTCTGTTGCGCCCCTTGAGAGGGTCAAAATACTCTGGCAGACAAGGACCCCAGGATATCACTCGCATGGTGTGTATCAATCTTTGAATAGGATAGTAAAGAATGAAGGTTTTCTAGGATTGTACAAAGGAAATGGAGCTAGTGTTATCCGGATTGTTCCATATGCTGCCTTGCATTTTATGACATATGACCGGTACAAGTGTTGGATCTTGGATAATTGTCCTATGTTAGGATCAGGTCCTGTTGTTGATCTCTTAGCTGGCTCTGCAGCAGGAGGAACTTCAGTTTTATTTACATATCCTTTGGATCTAGCTCGTACCAAACTTGCTTATCAGGTGGCAGACACCAGAGGAAGTATTGAAAATGGTCTGAAACTTGTTCATTCTCGACCTGCACAGAATGGGATCAAAGGTGTGCTTACTAGTGTCTACAAGGAAGGGGGAGTTCGTGGACTATACAGAGGTGTAGGACCAACCCTGACTGGAATTCTTCCATATGCTGGTTTGAAGTTCTACATGTATGAGAAATTGAAGATGCATGTTCCTGAAGAACATAGAAAGTCCATTTTGATGCGTCTTTCTTGTGGAGCTTTGGCTGGCTTGTTTGGACAGACCGTAACATACCCTTTGGATGTTGTTAAGAGACAAATGCAGGTTGGCAGCCTGCAGAATTCAGTTCATGGTGAGGTCAGATACAAGAATGCATTTGATGGACTTAGGACGATTGCTGCTAATCAAGGATGGAGGCAGTTGTTTGCAGGCGTAAGCATTAACTACATCAGGATTGTTCCATCAGCGGCAATTAGTTTCACGACATATGACATGATGAAAGCTTGGCTTGGCATATCACCCCAACACAAGAAGTCCCAATCATCTTCCGCAACATAA 1038 0.4345 MNSSQEPTLSANVAGLMDNASLQREKSSLDAMPVYVKELIAGGFAGALSKTSVAPLERVKILWQTRTPGYHSHGVYQSLNRIVKNEGFLGLYKGNGASVIRIVPYAALHFMTYDRYKCWILDNCPMLGSGPVVDLLAGSAAGGTSVLFTYPLDLARTKLAYQVADTRGSIENGLKLVHSRPAQNGIKGVLTSVYKEGGVRGLYRGVGPTLTGILPYAGLKFYMYEKLKMHVPEEHRKSILMRLSCGALAGLFGQTVTYPLDVVKRQMQVGSLQNSVHGEVRYKNAFDGLRTIAANQGWRQLFAGVSINYIRIVPSAAISFTTYDMMKAWLGISPQHKKSQSSSAT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1019 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 230 IPR018108 -
Sto5g1019 345 Gene3D Mitochondrial carrier domain 32 331 IPR023395 -
Sto5g1019 345 Pfam Mitochondrial carrier protein 35 121 IPR018108 -
Sto5g1019 345 Pfam Mitochondrial carrier protein 238 330 IPR018108 -
Sto5g1019 345 Pfam Mitochondrial carrier protein 131 231 IPR018108 -
Sto5g1019 345 PANTHER SOLUTE CARRIER FAMILY 25 20 338 - -
Sto5g1019 345 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 20 338 - -
Sto5g1019 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 237 329 IPR018108 -
Sto5g1019 345 SUPERFAMILY Mitochondrial carrier 35 325 IPR023395 -
Sto5g1019 345 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Sto5g1019 345 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Sto5g1019 345 PRINTS Mitochondrial carrier protein signature 94 114 IPR002067 GO:0055085
Sto5g1019 345 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Sto5g1019 345 PRINTS Mitochondrial carrier protein signature 203 221 IPR002067 GO:0055085
Sto5g1019 345 PRINTS Mitochondrial carrier protein signature 246 268 IPR002067 GO:0055085
Sto5g1019 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 119 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1019 Sto-Chr5 6847717 6851181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1019 20 312 Organic Solute Cotransporters AT4G26180 53.401 4.35e-110 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1019 - - gmx:100784421 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1019 5 6847717 6851181 Sto5g1019 5 6847717 6851181 ECH