Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1010 ATGGAGTTTGAAGGTGCGGCGGAGGAGACGTCGCCCGTCGCTGGCCTCCTTTCTCTCGCTTCCGGCTCGCAGCAATCTTATGTCTCTGAACTCCTCTCCTTCACCCTCGATCGCCTTCACAAGGAACCAGAACTACTTCGGGTTGATGCGGAGCGGATTCAGAGGCAAATGCAAGAGGTTGCAGTGGGTAATTACCGAGCATTCATAGCCGCTGCTGATGCCTTGCTTGCTATTCGAGAGGAAGTCTCTTCTATTGACAAGCATCTTGACTCTCTGACAAATGAGATCCCAAAGCTGACATCTGGATGCAGTGAGTTCACAGAATGCGCGGAACAGATTTTAGATAAGAGGAAGATGAACCAAACAATGCTAGCCAATCACAGTACCTTGCTTGATTTGCTAGAAATTCCTCAACTTATGGACACATGTGTAAGGAATGGGAATTATGACGAAGCTTTAGATTTGGAGGCATATGTTTATAAACTTTCTACTATGCATCCAAAGTTGCCAGTTATTCAAGCATTGACTGTAGAAGTGAGGCAGACCACCCAATCTCTTCTTCATCAACTTTTTCAGAAACTTCGCTCAAATATTCAgTTACCTGAATGCCTCCGCATTATTGGATATTTGCGACGAATTGGAGTGTTTACTGAGTATGAAATGCGTTTGCAGTTCTTGAGATGCCGGGAGGTGTGGCTTACTGGTATACTTGATGATCTGAACCAGACAAATCCATATGAGTACTTAAAAGGGATGGTTAACTGTCATCGAATGCATCTTTTTGACGTAGCCAATCAATACCGAGCTATATTTGCTGATGACACATCAGGAAGTGAGGAAAATTATGATGGTGGGTTACTTTTTAGTTGGGCAATGCATCAAATCACTTCAAACCTTCAAACTCTGAAAGTTATGCTTCCAAAGATAACTGAAGGTGGATCACTGTCAAATATTTTGGATCAATGCATGTACTGTGCTATGGGACTTGGTTGGGTTGGACTAGATTTTCGGGGCTTGCTCCCATCACTTTTTGAAGAGGCAGTTCTCAACTTATTCTCAAAAAATATGAGTACAGCAGTAGAGAACTTTCAGTTGGTCTTGGATTCACATCGTTGGGTTCCCCTGCCAGTGGTTGGCTTTCCTACTGCCAAAACTCATGGTGAAGAAAGTACGGAGGATGTCACCCCACCTTCTTATTTGATGGAACATCCACCTCTTGCTGTTTTTGTTAATGGTGTATCTGCAGCAATGAATGAGCTGCGTCCCTGTGCTCCTATAAGTTTGAAACATATCCTTGGACAAACTTTGATTAAGGGATTACAGGCTGTTTCTGACTCTTTGCTGCGATACAATACAACTAGGGTGCTGAGAGAAAATGAATCTGGACTTTTCCTCTCACTTTGCCGGACATTTACAGAGgtTGTTTATCCTCATTGTGCAACCTGTTTCGGTCGATGTTATCCTGGTGGAGCTGCTCTTATCATGGATGCAAAGAATTTATATGATGGGATCAGCCGCCTATTAGCAGCCTCCTCTGCAAAAGAACTCCCAAAACCAGTTAATAATGAGGAGACGATGAGTGTAGCTGAGAATGGTGACCTGCCAGCGGTGGAAAATGGAGAAATATCTGATACCAAACAAAATGAAGCCATCAATGCTGACGACGGGAACAAAAGCCCCATTTCCCAGACTGGTCAGACAGACATTAATCCTGAAGAGCTCGCAGAAAAAGATTAG 1737 0.4358 MEFEGAAEETSPVAGLLSLASGSQQSYVSELLSFTLDRLHKEPELLRVDAERIQRQMQEVAVGNYRAFIAAADALLAIREEVSSIDKHLDSLTNEIPKLTSGCSEFTECAEQILDKRKMNQTMLANHSTLLDLLEIPQLMDTCVRNGNYDEALDLEAYVYKLSTMHPKLPVIQALTVEVRQTTQSLLHQLFQKLRSNIQLPECLRIIGYLRRIGVFTEYEMRLQFLRCREVWLTGILDDLNQTNPYEYLKGMVNCHRMHLFDVANQYRAIFADDTSGSEENYDGGLLFSWAMHQITSNLQTLKVMLPKITEGGSLSNILDQCMYCAMGLGWVGLDFRGLLPSLFEEAVLNLFSKNMSTAVENFQLVLDSHRWVPLPVVGFPTAKTHGEESTEDVTPPSYLMEHPPLAVFVNGVSAAMNELRPCAPISLKHILGQTLIKGLQAVSDSLLRYNTTRVLRENESGLFLSLCRTFTEVVYPHCATCFGRCYPGGAALIMDAKNLYDGISRLLAASSAKELPKPVNNEETMSVAENGDLPAVENGEISDTKQNEAINADDGNKSPISQTGQTDINPEELAEKD 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1010 578 SUPERFAMILY Cullin repeat-like 129 347 IPR016159 -
Sto5g1010 578 PIRSF COG8 7 576 IPR016632 GO:0017119
Sto5g1010 578 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 18 525 IPR007255 GO:0017119
Sto5g1010 578 MobiDBLite consensus disorder prediction 541 570 - -
Sto5g1010 578 MobiDBLite consensus disorder prediction 515 578 - -
Sto5g1010 578 Pfam Dor1-like family 28 361 IPR007255 GO:0017119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1010 Sto-Chr5 6800153 6804219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1010 K20295 - gmx:100781620 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1010 5 6800153 6804219 Sto5g1010 5 6800153 6804219 ECH