Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g1000 ATGGAAGGGATGATGCGAGTACCTTACGAGAGTTCGGTGAAGTTAATGTTAGCTTCATTGGAGCGCAATTTGCTACCTGATGTTCTTACACGCACCCTCACTCGTTTCCTTCTATCCTCTCGCCTTCACTCCGGTTACAAGCCCTCTCTTCAACTTCAGCTCTCACATCTTTTGGAATTCGTACACTCTTTAAAAGAGATGCCTATTGCCATCAACACTGATAAGCCAAAAGAACAGCATTATGAATTACCAACATCTTTCTTCAAGCTAGTGCTGGGCAAGAATCTCAAATACAGTGTGCCTATATGTATGAACTATTGCAGTTGTTGCTACTTCTCTTCTGCATCAAAGACACTGGAGGATGCTGAAGAAGCAATGTTGGAACTGTACTGTGAGAGATCACACATGAAAGATGGTCATAGCGTTCTTGATGTTGGGTGTGGTTGGGGATCACTGTCTATATACATCGCCAACAAGTACAGAAACTCCAGGGTCACAGGGATCTGCAATTCCACAACTCAAAAGGCATATATTGAGGAGAAATGCCGGGATCTTATGCTGCAAAATGTGGAGATTATTGTTGCAGATATTAGCACATTTGAGATGGATGCTTCTTATGACAGAATATTTTCCATAGAGATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAAGAAGATATCCGGTTGGCTGAAAGAAGATGGCTTTCTTTTTGTTCATCATTTCTGCCATAAAGCATTTGCTTACCATTTTGAGGACAAAAATGAGGATGACTGGATTACTAGGTATTTCTTCGCTGGAGGAACAATGCCTTCAGCCAATCTACTACTTTATTTTCAGGATGATGTTACTGTCGTCAACCATTGGCTTGTAAATGGGAAACACTATGCACAGACAAGCGAAGAATGGCTCAAAAGAATGGATCATTGCATGACCTCCATCAAGCCAATTATGGAATCAACATATGGCAAGGACTCGGCCGTTAAGTGGACTGCTTATTGGAGAACATTCTTCATATCTGTTGCAGAACTATTTGGCTACAATAATGGTGAAGAATGGATGGTTGCACACTTCTTATTTAAGAAGAAATGA 1095 0.4073 MEGMMRVPYESSVKLMLASLERNLLPDVLTRTLTRFLLSSRLHSGYKPSLQLQLSHLLEFVHSLKEMPIAINTDKPKEQHYELPTSFFKLVLGKNLKYSVPICMNYCSCCYFSSASKTLEDAEEAMLELYCERSHMKDGHSVLDVGCGWGSLSIYIANKYRNSRVTGICNSTTQKAYIEEKCRDLMLQNVEIIVADISTFEMDASYDRIFSIEMFEHMKNYKDLLKKISGWLKEDGFLFVHHFCHKAFAYHFEDKNEDDWITRYFFAGGTMPSANLLLYFQDDVTVVNHWLVNGKHYAQTSEEWLKRMDHCMTSIKPIMESTYGKDSAVKWTAYWRTFFISVAELFGYNNGEEWMVAHFLFKKK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g1000 364 Gene3D Vaccinia Virus protein VP39 71 358 IPR029063 -
Sto5g1000 364 PANTHER - 4 364 - -
Sto5g1000 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 359 IPR029063 -
Sto5g1000 364 Pfam Mycolic acid cyclopropane synthetase 78 320 - -
Sto5g1000 364 CDD AdoMet_MTases 142 243 - -
Sto5g1000 364 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 4 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g1000 Sto-Chr5 6739949 6743398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g1000 79 306 Acyl Lipid Metabolism Gene Families AT3G23510 28.326 3.89e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g1000 - - gmx:100818389 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g1000 5 6739949 6743398 Sto5g1000 5 6739949 6743398 ECH