Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0981 ATGATAGCTTACCTGGAGCACTTCCTTCACGGCACTGACAATGAATCCAGGCCCCACGATGACTTCACGGGCCTCTCTCACCTCCAACTCCACGGCACCATCGACTGTTCTCCCACCAGCATAGCCACTAGAGATTTCGGAGGCATGCAATCCGTGAAGCCCTTGGCCTTCATCCGACCCGCCGCCGTGGACGACGTCGCTCGGGTCCTCAAAGCCGCCGCTGCCTCCTCCAACCTGACGGTGGCAGCCCGCGGCAACGGCCACTCCATTAACGGGCAGGCTATGGCCGATCAAGGCCTGGTCCTCGACATGCGTAGCACGGAGGAGTATTTTCGTGTGGTGTGGATGAATGGCTCTCCCTACGTCGACGTATCGGGAGGGGCATTATGGGAAGATGTACTGAAACGGTGCGTGGCGAAGGGGCTAGCCCCGAGGTCGTGGACGGATTATCTGGGTTTAACGGTAGGGGGGACTTTGTCTAATGCGGGTGTGAGCGGCCAGGCCTTCCGTTACGGTCCTCAAACGTCAAACGTAACGGAATTGGAGATTGTAACTGGCAAAGCCGAAACCTTGGTCTGCTCTGAAACCCAAAATTCCGACCTTTTCTTCGGGGCCTTGGGTGGTCTGGGTCAGTTCGGTATTATCACCAGAGCCAGGGTCGTGCTTCAACAAGCACCAGATAGGGTGAGATGGATAAGGGTGGTTTACTCTGAATTTCAAGACTTCACTCGGGATGCCGAGTCGCTGGTGACTCGTCCAGAGGGTGACTCATTCGATTACGTGGAAGGGTTCGTGTTTGTGAACAGTGACGACCCGGCCAACGGATGGCCCACCGTGCCCTTGAGCCCGGACCAATGCTTCCACCCGATTTACATCCCTCACGCCGCTGGCCCCGTCCTTTACTGCCTCGAACTCGCTCTTCACTATCGTAACTCAGACCACCCTTCAGACGTTGATGCGGATGTGGATAGATTGCTTCGACGGCTACGATTTGTTGAGGGTTTGAAGTTCCAGGTGGATGTGGGGTACGTGGAGTTCTTGCTGCGTGTGAAGCGTGTGGAGGAAGAAGCTAAAGCCAACGGCATCTGGGATGCCCCACACCCTTGGCTCAACCTCTTCGTATCCAAATCCAACATCCTTGATTTTGATCGTGTGGTGTTTAAGAGAATCCTCAAGAACGGGGTTGGTGGGCCCATTTTGGTCTACCCTCTCTTACGAAGCAAGTGGGATGGCCGGACATCGGTGGTGTTGCCGGAGAGCGAGATATTCTACATTGTGGCGTTGCTCCGATTCAACCCGGAAGCCCCAAAAGGGCCGGCCCCGGAATCATTGGTGGCCCAAAACCAAGAGATCATTCAATCTTGCTGCATCAGAGGCTTTGATTTCAAGCTATACCTTCCTCACTACAAGTCACAGGAGGATTGGAAGCGACACTTTGGGAATCAATGGACCACATTCCTTGACAGAAAGAAGTCTTACGATCCCTTCTTTATCCTCGCTCCAGGACACAAAATATTCTCCAGAAACCCCCAACCTTAA 1539 0.5432 MIAYLEHFLHGTDNESRPHDDFTGLSHLQLHGTIDCSPTSIATRDFGGMQSVKPLAFIRPAAVDDVARVLKAAAASSNLTVAARGNGHSINGQAMADQGLVLDMRSTEEYFRVVWMNGSPYVDVSGGALWEDVLKRCVAKGLAPRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELEIVTGKAETLVCSETQNSDLFFGALGGLGQFGIITRARVVLQQAPDRVRWIRVVYSEFQDFTRDAESLVTRPEGDSFDYVEGFVFVNSDDPANGWPTVPLSPDQCFHPIYIPHAAGPVLYCLELALHYRNSDHPSDVDADVDRLLRRLRFVEGLKFQVDVGYVEFLLRVKRVEEEAKANGIWDAPHPWLNLFVSKSNILDFDRVVFKRILKNGVGGPILVYPLLRSKWDGRTSVVLPESEIFYIVALLRFNPEAPKGPAPESLVAQNQEIIQSCCIRGFDFKLYLPHYKSQEDWKRHFGNQWTTFLDRKKSYDPFFILAPGHKIFSRNPQP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0981 512 ProSiteProfiles PCMH-type FAD-binding domain profile. 50 225 IPR016166 GO:0071949
Sto5g0981 512 Gene3D - 104 227 IPR016169 -
Sto5g0981 512 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 226 506 IPR015345 GO:0009690|GO:0019139|GO:0050660
Sto5g0981 512 Pfam FAD binding domain 54 194 IPR006094 GO:0050660
Sto5g0981 512 Gene3D - 42 507 IPR016167 -
Sto5g0981 512 PANTHER GULONOLACTONE OXIDASE 14 511 - -
Sto5g0981 512 SUPERFAMILY FAD-binding/transporter-associated domain-like 35 222 IPR036318 GO:0050660
Sto5g0981 512 PANTHER CYTOKININ DEHYDROGENASE 7 14 511 - -
Sto5g0981 512 SUPERFAMILY FAD-linked oxidases, C-terminal domain 226 506 IPR016164 GO:0003824|GO:0050660
Sto5g0981 512 Gene3D - 229 465 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0981 Sto-Chr5 6609496 6613143 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0981 K00279 - jre:108985996 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0981 5 6609496 6613143 Sto5g0981 5 6609496 6613143 ECH