Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0979 ATGGACTTTACAGATGATTTATTGCATATGGTTTTCTCTTTCTTGGATCATCCGGATCTCTGCAAAGCCGCCGGAGTTTGTAGGCAGTGGCGAGCTGCTAGTGCTCATGAGGATTTCTGGAGAtgtttgaattttgaagatCGAAACATAACTGTAGGTCAATTTGCGGACATGTGTACACGATATCCTAATGCCACAGCAGTAAGGGTATCCGGTCCTTCTATTCACTGGCTTGTTATGGAGGCCATCTCTTCATTGAGAAATCTGGAGGCTATAACATTGGGAAGAGGAACGATAGTGGATAATTTCTTCCATGCTTTAACTAATTGTTCTATGTTGAAAAGATTACACATCAACGATGCTACGCTTGGCAATGGTATTCAGGAGATACCTATTAATCATGATAGATTATGTCATCTCCAACTAACAAAATGCCGTGTAATGCGTATATCAGTCAGGTGCCCACAACTTGAAACTTTGTCATTGAAGCGCAGTAACATGGCACAGGCTGTGCTTACTTGCCCTATTCTGCATGAGCTTGACATAGGCTCTTGCCACAAACTTCCAGATGCTGCAATTCGTGGAGCTGCAACATCATGCCCTCAATTAGTGTCCCTGGACTTGTCTAATTGTTCATGTGTTAGTGATGAAACAATACGTGAAATAGCCATGAATTGTGCTAACCTTAGTTTTCTTGATGCATCGTACTGCCCAAATATATCTCTGGAGTCTGTTAGACTGCCAATGTTGACAGTTCTCAAGCTTCACAGCTGTGAGGGTATCACTTCAGCCTCAATGGCTGCCATATCTTATTGTTATCTGTTGGAGGTTTTGGAGCTTGACAACTGCAGTCTATTGACATCTGTGTCGTTGGATCTTCCTCGCTTGCAAAGTATTAGATTGGTACATTGTCGCAAATTTTCTGATTTGAACTTGAGGACTATAATGCTGTCTTCAATTGTGGTGTCTAATTGTCCTGCACTCCATCGCATCAATGTCACTTCAAATTCACTTCAAAAATTAGCGTTGAAAAAACAGGACAGTTTAACTGCATTAGCTTTGCAATGCCAATCTTTGCAAGAAGTGGACCTCACTGACTGTGAATCTTTGACAAATTCCATATGTGAAGTTTTTGGTGATGGTGGAGGATGCCCTATGTTGAAATCACTAATTCTCGATAACTGTGAGAGCCTGACAGCAGTTCAGTTCATCAGTAGCTCTCTTGTCAGTCTTTCCCTTGTTGGTTGCCGGGCAATCACTACTCTTGAGCTCACATGCCCTAATCTTGAGAGAGTTTGTTTGGATGGTTGTGATCATTTAGAGAGGGCGTCATTCTGTCCTGTTGCTCTTCGGTGTCTCAATTTGGGAATATGTCCCAAATTGAACATACTTTGCATTGAAGCACCATTTATGGTCTCACTTGAATTGAAAGGATGTGGCGTCCTATCTGAAGCATCCATTAATTGTCCACTCCTGGCATCCTTGGATGCTTCCTTCTGCAGCCAACTAACAGATGACTGCTTGTCTGCAACAACTGCCTCATGCCCGTTGATTGAGTCATTAATATTGATGTCATGTCCATCAATTGACTCACATGGACTTTGTTCTCTGCATTGGCTTCAAAATTTGACTTTTCTTGATTTATCATACACTTTTTTGATGAACTTGGAACCTGTTTTTGAGTCTTGTTCGCAACTAAAGGTGTTGAAGTTACAGGCATGCAAGTATCTCACTGACTCGTCACTTGAGCCTCTTTACAAGGGAGGTGCTTTACCAGCACTTCAGGAGTTGGATTTGTCTTATGGAACCATTTGTCAATCAGCCATAGAGGAGCTTCTTGCTTGCTGTACACACCTAACTCATCTGAGCCTAAATGGCTGTGTGAATATGCATGATTTAAATTGGGGCTTCAATCATGGACAGATTGCTGAATTGCCTGCTTTAAACATCTCATCTGGTGTGATTTCAAATGAGAATGTCCATAGGTTAAGTGAGGAACCCAACCGTTTATTGCAGAGCCTAAACTGCGTGGGATGTCCCAATGTTAGGAAAGTTCTCATTCCACCAGCGGCTCATTGTTTTTATTTACTATACTTGAATCTTTCTTTATCGGCAAATTTGAAGGAGGTCGATGTGGCTTGTCTCAACTTGTGCTTTCTTAatttaagCAATTGCTCCTCTTTGGAAATTTTGAAGCTTGAGTGTCCGAGATTAACCAGTCTATTTCTTCAGTCTTGCAACATAGACGAGGAAGCTGTTGAAGCTGCTATATCAAAATGCAGTATGCTGGAGACTCTTGACGTCCGCTTTTGTCAGAAGATAAGCTCAACGAGCATGGGAAGATTACGTGCAGCTTGTCCTAGTCTGAAGCGTATATACAGCAGCTTGTCTACTTAA 2397 0.4155 MDFTDDLLHMVFSFLDHPDLCKAAGVCRQWRAASAHEDFWRCLNFEDRNITVGQFADMCTRYPNATAVRVSGPSIHWLVMEAISSLRNLEAITLGRGTIVDNFFHALTNCSMLKRLHINDATLGNGIQEIPINHDRLCHLQLTKCRVMRISVRCPQLETLSLKRSNMAQAVLTCPILHELDIGSCHKLPDAAIRGAATSCPQLVSLDLSNCSCVSDETIREIAMNCANLSFLDASYCPNISLESVRLPMLTVLKLHSCEGITSASMAAISYCYLLEVLELDNCSLLTSVSLDLPRLQSIRLVHCRKFSDLNLRTIMLSSIVVSNCPALHRINVTSNSLQKLALKKQDSLTALALQCQSLQEVDLTDCESLTNSICEVFGDGGGCPMLKSLILDNCESLTAVQFISSSLVSLSLVGCRAITTLELTCPNLERVCLDGCDHLERASFCPVALRCLNLGICPKLNILCIEAPFMVSLELKGCGVLSEASINCPLLASLDASFCSQLTDDCLSATTASCPLIESLILMSCPSIDSHGLCSLHWLQNLTFLDLSYTFLMNLEPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTICQSAIEELLACCTHLTHLSLNGCVNMHDLNWGFNHGQIAELPALNISSGVISNENVHRLSEEPNRLLQSLNCVGCPNVRKVLIPPAAHCFYLLYLNLSLSANLKEVDVACLNLCFLNLSNCSSLEILKLECPRLTSLFLQSCNIDEEAVEAAISKCSMLETLDVRFCQKISSTSMGRLRAACPSLKRIYSSLST 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0979 798 Pfam F-box-like 5 44 IPR001810 GO:0005515
Sto5g0979 798 ProSiteProfiles F-box domain profile. 1 43 IPR001810 GO:0005515
Sto5g0979 798 SUPERFAMILY L domain-like 478 793 - -
Sto5g0979 798 PANTHER OS10G0396666 PROTEIN 1 760 IPR044703 GO:0010252|GO:1905393
Sto5g0979 798 SUPERFAMILY RNI-like 350 582 - -
Sto5g0979 798 Gene3D Ribonuclease Inhibitor 468 556 IPR032675 -
Sto5g0979 798 Gene3D Ribonuclease Inhibitor 557 639 IPR032675 -
Sto5g0979 798 Gene3D Ribonuclease Inhibitor 245 317 IPR032675 -
Sto5g0979 798 SMART LRR_CC_2 174 199 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 489 514 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 616 645 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 293 318 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 735 759 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 760 785 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 515 540 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 563 588 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 384 407 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 200 225 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 426 451 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 247 272 IPR006553 -
Sto5g0979 798 SMART LRR_CC_2 356 381 IPR006553 -
Sto5g0979 798 SUPERFAMILY L domain-like 54 444 - -
Sto5g0979 798 SUPERFAMILY F-box domain 2 56 IPR036047 GO:0005515
Sto5g0979 798 PANTHER OS10G0396666 PROTEIN 1 760 - -
Sto5g0979 798 SMART fbox_2 3 43 IPR001810 GO:0005515
Sto5g0979 798 Gene3D Ribonuclease Inhibitor 318 467 IPR032675 -
Sto5g0979 798 Gene3D Ribonuclease Inhibitor 640 797 IPR032675 -
Sto5g0979 798 Gene3D Ribonuclease Inhibitor 1 244 IPR032675 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0979 - - gmx:100782842 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0979 5 6588517 6594705 Sto5g0979 5 6588517 6594705 ECH