Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0970 ATGGTTCAAATTTTTACTGAGGAGATCTCTGTAGCTGTTGTTGCATCAAATCAAGCCCACTGGAGTACGGATGCATTGGAGAAGAGCATTAGAACACAGTTTGATTTCTGGTGGAGCTTGACTGGTGGGTATTCTATGCTGTCATTTATAACAGAAAATATGGGCCTTCTCTGCAGCAGAAATCGTCGTCATAATAATGCTGATGCTGAAGAAAATACACAGGCTGCAGAAATTGAAAGGAGGATAGAGCTAGAAACAAAGGCTGAAAAGCATATTCAGAAACTCCTACTACTTGGTACAGACATAAAACTCTTGTTTCAGACTGGCTTTGATGAAGCAGAGTTAAAAAGCTATGCACCTGTCATCCACGCTAATGTGTATCAGACAATAAAAATACTGTATGATGGCTCGAAGGAATTGACTCAAAATGATCCTGATTCTTCAAAGTATGTTATATCCGATGGAAAGAAGGATATTGGAGAAAAACTGTCAGAAATTGGAGGCAGGCTGGATTACCCATGTCTCACCACAGAACTTGCTCAGGAAATTGAGACTCTGTGGAAGGATGCTGCTATTCAGGAAACTTATGCCCGTGGTAATGAGCTCCAAGTTCCAGATTGTGCCAGTTACTTTATGGAAAATTTGCGGAGACTGTCTGATGCAAATTATGTTCCGACAAAGGAGGATGTTCTGTATGCAAGAGTCCGCACCACTGGTGTAGTGGAGATCCAATTCAGCCCAGTTGGAGAAAACAAGAAAAGTGGTGAAGTATATAGACTCTTCGACGTTGGAGGCCAGAGAAATGAGAGGAGAAAATGGATTCATTTGTTTGAAGGAGTTACGGCCGTAATATTCTGTGCTGCTATTAGCGAGTATGCTATAGTTGGTTGTTCCGAAGGTGTTGCACAAGAAAACAAAGGTCATCAAAATTCAAACCCAGTTTTAGATTGGCATTTTGGTGGAGTAGTAGAAGAGACTGGGAAGTTAAGGTGTACCTTTGTTTGCAGTCAAATCACTATTTTGAATACTAGGAAAACAATGTACGGGTATGATCAAACTCTTTTTGAGGATGAAAACAAGAACAGAATGATGGAGACCAAGGAACTTTTTGAGTGGGTCCTGAAACAACCATGTTTTGAGAAAACATCATTCATGTTATTTTTAAACAAGTTTGACATTTTCGAGAAGAAGATTCACAAGGTCCCACTTACTGTATGCGAGTGGTTCAAAGATTACCAGTCAGATTCCACAGGGAAAGAAGAGATTGAGAATGCATACGAGTTTGTGAAGAAAAAGTTTGAGGAAATATATTTCCAGAGCACTGCCCCAGACCGAGTAGATCGCGTGTTTAAGATCTACCGAACTACTGCCCTTGATCAGAAGGTTGTGAAGAAGACTTTCAAGCTGGTTGATGAGACTTTAAGGCGGAGGAATCTCTTTGAGGCTGGCCTATTATGA 1458 0.4067 MVQIFTEEISVAVVASNQAHWSTDALEKSIRTQFDFWWSLTGGYSMLSFITENMGLLCSRNRRHNNADAEENTQAAEIERRIELETKAEKHIQKLLLLGTDIKLLFQTGFDEAELKSYAPVIHANVYQTIKILYDGSKELTQNDPDSSKYVISDGKKDIGEKLSEIGGRLDYPCLTTELAQEIETLWKDAAIQETYARGNELQVPDCASYFMENLRRLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVTAVIFCAAISEYAIVGCSEGVAQENKGHQNSNPVLDWHFGGVVEETGKLRCTFVCSQITILNTRKTMYGYDQTLFEDENKNRMMETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKIHKVPLTVCEWFKDYQSDSTGKEEIENAYEFVKKKFEEIYFQSTAPDRVDRVFKIYRTTALDQKVVKKTFKLVDETLRRRNLFEAGLL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0970 485 SUPERFAMILY Transducin (alpha subunit), insertion domain 110 235 IPR011025 GO:0007165
Sto5g0970 485 Pfam G-protein alpha subunit 75 293 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 Pfam G-protein alpha subunit 347 473 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 54 293 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 337 485 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 PRINTS Plant G protein alpha subunit signature 80 89 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto5g0970 485 PRINTS Plant G protein alpha subunit signature 243 258 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto5g0970 485 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 337 485 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto5g0970 485 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 54 293 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Sto5g0970 485 PRINTS Alpha G protein (transducin) signature 223 245 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 PRINTS Alpha G protein (transducin) signature 258 275 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 PRINTS Alpha G protein (transducin) signature 280 308 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 482 IPR027417 -
Sto5g0970 485 SMART galpha_1 72 484 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 CDD G-alpha 93 479 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto5g0970 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 294 IPR027417 -
Sto5g0970 485 Gene3D - 303 485 IPR027417 -
Sto5g0970 485 Gene3D - 111 236 IPR011025 GO:0007165
Sto5g0970 485 ProSiteProfiles G-alpha domain profile. 80 485 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0970 Sto-Chr5 6528672 6534903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0970 K19729 - pop:7476677 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0970 5 6528672 6534903 Sto5g0970 5 6528672 6534903 ECH