Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0959 ATGGGCAGTGAAGGTGATCTTTTCTCTACCGAGATAGTGAAGCGCGGGATTGAACCATCTGGACCCAACGCTGGGTCTTTGAGCTTCTCAGTGAGGGTGAGGAGGCGGCTGCCAGACTTTCTTCAGTCAGTGAACCTCAAGTATGTGAAGTTGGGTTACCATTATCTCATAAACCATGGCATCTACTTGGTCACCATACCAGTGCTTTTGCTGGTGTTTAGCGCAGAGGTATGGAAGAAGCTTTGGGAGGACACTCGCTATGACCTTGCCACTCTCCTCGCTTTCTTTGGTACCTTCGTTTTCACCCTCTCTCTATACTTGATGTCAAGGCCTCGCTCCATTTATCTCATCGATTTCGCTTGCTATCAACCCAGTGACGACCTCAAGTTCATTGAAGTGGCAAGAAAATCAGGCAAGTTTGATGAGGGGAGCCTTGAGTTCCAGAAGAGGACGGTGATGTCGTCAGTGATTGGGTGTAGTGAAAAGTGCGCAACGATGAAAGAAGGTCGTGATGAGGCGTCCATGGTGATGTTTGGAGCTCTGGACGAGCTGTTCGAGAAAACCCGTGTTCGTCCCAAGGACGTGGCTGTGGACTTGGCCAGAGACATGCTCCAATCCAACCCAAACAACTACGCTGTGGTGGTCAGCACAGAGATGGTTGGGTTCAATTGGTATCAAGGCAAACACAGGTCTATTCTCATTCCAAACTGTTTCTTTCGCATGGGTTGCTCTGCTCTTTTGCTCTCCAACCGTCGTCGTGACTATTCTCGTGCCAAGTACCGCCTTGACCATATTGTTCGCACACATAAAGGTGCTGATGATCGCAGCTTCAGGTGTGTGTACCAAGAGGAAGATGAGCAGAAATTGAAGGGACTAAAGCATTTCTGTGTGCATGCTGCCAGCAAGATCATTCTTGAGGAGCTTCAGAGGAACCTGGAATTGAGTGAGGAGAACATGGAGGCGTCTAGGATGACACAGAAGCGCTTTGGCAACACATCCAGCAGCAGCATATGGTATGAGCTGGCTTACTTGGAAGCCAAGGAGAGGGTGAGAAGAGGAGACCGCGTGTGGCAAATTGCATTTGGCTCTGGCTTCAAGTGTAACAGTGTGGTTTGGCGTTCCATGCGCCGAATCAAGAAGCCTTCGACCAACCCTTGGCTTCACTGCATCCACAGATATCCTCTGCCCTCTAACACATGA 1200 0.4967 MGSEGDLFSTEIVKRGIEPSGPNAGSLSFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLVTIPVLLLVFSAEVWKKLWEDTRYDLATLLAFFGTFVFTLSLYLMSRPRSIYLIDFACYQPSDDLKFIEVARKSGKFDEGSLEFQKRTVMSSVIGCSEKCATMKEGRDEASMVMFGALDELFEKTRVRPKDVAVDLARDMLQSNPNNYAVVVSTEMVGFNWYQGKHRSILIPNCFFRMGCSALLLSNRRRDYSRAKYRLDHIVRTHKGADDRSFRCVYQEEDEQKLKGLKHFCVHAASKIILEELQRNLELSEENMEASRMTQKRFGNTSSSSIWYELAYLEAKERVRRGDRVWQIAFGSGFKCNSVVWRSMRRIKKPSTNPWLHCIHRYPLPSNT 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0959 399 CDD CHS_like 89 372 - -
Sto5g0959 399 PANTHER 3-KETOACYL-COA SYNTHASE 10 6 197 - -
Sto5g0959 399 PANTHER 3-KETOACYL-COA SYNTHASE 10 293 395 - -
Sto5g0959 399 PANTHER 3-KETOACYL-COA SYNTHASE 10 195 293 - -
Sto5g0959 399 PIRSF Very_long_ch_3-ktacl-CoA_syn 195 293 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 197 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 PIRSF Very_long_ch_3-ktacl-CoA_syn 288 399 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 Coils Coil 298 325 - -
Sto5g0959 399 Pfam FAE1/Type III polyketide synthase-like protein 195 293 IPR013601 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 Pfam Chalcone and stilbene synthases, C-terminal domain 295 375 IPR012328 -
Sto5g0959 399 Gene3D - 289 375 IPR016039 GO:0016746
Sto5g0959 399 Gene3D - 195 288 IPR016039 GO:0016746
Sto5g0959 399 SUPERFAMILY Thiolase-like 264 374 IPR016039 GO:0016746
Sto5g0959 399 PANTHER 3-KETOACYL-COA SYNTHASE 293 395 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 PANTHER 3-KETOACYL-COA SYNTHASE 6 197 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 PANTHER 3-KETOACYL-COA SYNTHASE 195 293 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto5g0959 399 SUPERFAMILY Thiolase-like 100 257 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0959 Sto-Chr5 6457562 6459118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0959 291 396 Miscellaneous Gene Families AT2G26250 77.570 4.97e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0959 K15397 - psom:113335750 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0959 5 6457562 6459118 Sto5g0959 5 6457562 6459118 ECH