Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0941 ATGGCTCTGGTCAACCCATTTCTCTCCCACGCCAAAACTAGTCTGGCCTTTTGTGTTTCCACTCCACCGTTGAAGCAAAACTCACCACTCATATTTCTCTGCTCTCTCTCATCATCCAATTCCTTCAAGCCCTTATTATCATCACCCACATCCACAAGGAAGCCATCATCATCAAGGACAAGGCGCGAGGCCATCGAAGGTCGTGTGAAAGATGCTCCTCCACTTGAAGATCATAGCAAGGTTCTTGTGGGTCCGTCCAGTGAGGAAGAGCGGAGAGGTGATAGGATCGTGGCAGATTACGATTGGACAGAGGAATGGTACCCTCTGTATTTGACCCACAATGTTCCAGACGATGCACCTCTGGCTCTCACAGTCTTTGATAAGCAGCTCGTGTTGTTCAGAGATGGCAATGGCGACCTTCGATGTTACCAAGATCGCTGCCCACACAGGTTAGCAAAACTATCTGAGGGCCAATTGATTGATGGAAGGCTTGAGTGCCTGTACCATGGATGGCAATTCGAAGGCGATGGGAAATGTGTGAAGATACCTCAGCTTCCGGCTGAAGCCAAAATCCCTCGTTCAGCTTGTGTGAGAACATATGAGGTGAGAGACTCTCAAGGAGTTGTGTGGGTATGGATGTCTCCACAGACCCCTCCTAACATTGATAAAATACCCTGGTTCGAGAACTTTGCAAGGCCTGGATTTCAAGATGTCTCAACAACTCATGAACTTCCCTATGATCACTCCATACTTTTGGAAAACCTGATGGACCCGGCTCATATTCCTATCTCACATGATAGAACAGATTGGACTGCAAAAAGAGAGAATGCACAACCACTATGTTTTGAGGTGACTGAACGAACAGACAGAGGATTTGCAGGTTGGTGGGGCGGAGAGAAAGATGGGACTATGCCGAACTTCTTACGCTTTGAAGCTCCCTGTGTTCTTCAAAACAAcagagaaattgttgataaaaATGGTGAAAAGCACTACTTCTCAGGTCTCTTCCTTTGTAGGCCAACAGGGCAAGGGAAATCCATGCTGATAGTAAGGTTTGGAACGACAAAACGTTCCCCACTGGCAAAACTGTTCCCTAAATGGTACTTCCATCAGAATGCAGGCAAGGTGTTTGAGCAAGACATGGGGTTTTTATCATCCCAAAATGAAATTCTAATGAAAGAGAAGGTTCCCACAAAGGAACTGTACCTTAATCTCAAATCCTCAGACACCTGGGTTGCTGAATACAGGAAGTGGATGGACAAAGTAGGGCATGGCATGCCGTATCACTTTGGCCACAGCACCATTTGTTTGCCTCAAGAGCCTGCTGTGGTTGAACATGCCCCTGCTGGACTCATTGCAGGACTCTCAGCTTCTTCACCTGCTAAGGGAGGCATTGGAACCATGCATGCCCCAAATTTAGCCAATAGATATTTTAGGCACGTAATACATTGCAAAGGGTGTAGAAGTGTCATTAAATCTTTCCAAACTTGGAAAAATGCTCTTTCGGCTATGGCTATTGCATTGGTTGCATTGGCTATTCTGGTGTCTGGGAGACAGTGGAAGGCCGTTCTGTTGGTATCGGCTTCTGCATGCTCAGCTGGAGTCTACGCATGTTCAACTGCCATTGCTATGAATACAACAAACTTTATCAGGACACACAGGAGACTATGA 1671 0.4614 MALVNPFLSHAKTSLAFCVSTPPLKQNSPLIFLCSLSSSNSFKPLLSSPTSTRKPSSSRTRREAIEGRVKDAPPLEDHSKVLVGPSSEEERRGDRIVADYDWTEEWYPLYLTHNVPDDAPLALTVFDKQLVLFRDGNGDLRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGDGKCVKIPQLPAEAKIPRSACVRTYEVRDSQGVVWVWMSPQTPPNIDKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHIPISHDRTDWTAKRENAQPLCFEVTERTDRGFAGWWGGEKDGTMPNFLRFEAPCVLQNNREIVDKNGEKHYFSGLFLCRPTGQGKSMLIVRFGTTKRSPLAKLFPKWYFHQNAGKVFEQDMGFLSSQNEILMKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTICLPQEPAVVEHAPAGLIAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCRSVIKSFQTWKNALSAMAIALVALAILVSGRQWKAVLLVSASACSAGVYACSTAIAMNTTNFIRTHRRL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0941 556 Pfam Rieske [2Fe-2S] domain 105 187 IPR017941 GO:0051537
Sto5g0941 556 SUPERFAMILY Bet v1-like 206 425 - -
Sto5g0941 556 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 65 556 - -
Sto5g0941 556 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 106 211 IPR017941 GO:0051537
Sto5g0941 556 Pfam Pheophorbide a oxygenase 310 395 IPR013626 GO:0010277
Sto5g0941 556 Gene3D - 233 424 - -
Sto5g0941 556 Gene3D - 101 230 IPR036922 GO:0051537
Sto5g0941 556 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 65 556 - -
Sto5g0941 556 SUPERFAMILY ISP domain 99 222 IPR036922 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0941 Sto-Chr5 6325513 6327902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0941 - - gmx:100808233 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0941 5 6325513 6327902 Sto5g0941 5 6325513 6327902 ECH