Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0919 ATGCAGAGATTGAAAGCTCTGCTACCCGACACTAGGTCCTCATTCCGCAGCTTTCATCGTAGAGCCTTCTCTGCTCAACCAAACTATGTCGAGCATGATGACGCTCAAGACCAGATTTTAGTCCAAGGAAGAGCTATATCAAGAGCTGCTGTTCTCAATAGACCATATTCTCTTAATGCACTCACTACTTCAATGGTAGCTCGACTGAAGAGATTGTATACTTCATGGGAAGATAACCCTGATATTGGCTTTGTTTTAATGAAGGCTAATGGCAGGGCTTTCTGTTCTGGCGGAGATGTTGTAAGGCTTTATCACTTATTGAATGAAGGAAATGCCGAGGAAGCTAAACAATTTTTTGAGACATTGTATAAGTTTGTATATCTTCAAGGGACATATCTTAAGCCACATGTTGCTATTTTGGATGGTATCACAATGGGATGTGGTGCTGGAATTTCGCTTCCTGGGATGTACCGTGTGGTAACTGATAAAACTCTGTTTGCTAACCCAGAGGCTCAAATGGGTTTTCACCCTGATGCAGGAGCTTCATTTTATCTTTCTCGTCTACCTGGCTACTTAGGGGAATACCTGGCCCTTACAGGAGACAAGCTTAATGGTGTTGAGATGATTGCCTGTGGCCTTGCTACTCACTATACACTAAATGCTAGGCTTGCTTTGCTTGAAGAACGCCTTGGTAAATTGGTCACAGATGACGCTTCTCTTGTAGAAGCATCCCTTGCGCAATATGGTGACCTTGTTTATCCTGACAGTAGAAGCGTTCTTAGCAAGATTGATACAATTGATAGATGTTTCGGCCATGATACGGTTGAGGAAATTATTGATGCTTTGGAGAAGGAGGCCGCTGTCTCTTATGATGAATGGTGTACAACAATACTGGGAAAGATACGGGAAGCCTCACCTTTGAGTTTAAAAGTTACTCTAAAATCTATTCGTGAAGGTAGATTTGAAACTCTTGATAAATGTCTTGTGCGTGAATACCGTCTATCCCTTCGAGGAATTTCTAAGCGGGTCTCCTCTGATTTCTTTGAGGGTACTCGAGCAAGACTGGTCGAGAAAGATTTTGCACCAAAGTGGGACCCACCTAGTCTGAAAGAAGTACCAGAGGACATGGTTGAACACTATTTCTCTCCATTTGACGAAGTTGAGTCTGAACTGGAACTGCCCACCACTTTGCGGGAACCTTATGTGTGA 1209 0.4309 MQRLKALLPDTRSSFRSFHRRAFSAQPNYVEHDDAQDQILVQGRAISRAAVLNRPYSLNALTTSMVARLKRLYTSWEDNPDIGFVLMKANGRAFCSGGDVVRLYHLLNEGNAEEAKQFFETLYKFVYLQGTYLKPHVAILDGITMGCGAGISLPGMYRVVTDKTLFANPEAQMGFHPDAGASFYLSRLPGYLGEYLALTGDKLNGVEMIACGLATHYTLNARLALLEERLGKLVTDDASLVEASLAQYGDLVYPDSRSVLSKIDTIDRCFGHDTVEEIIDALEKEAAVSYDEWCTTILGKIREASPLSLKVTLKSIREGRFETLDKCLVREYRLSLRGISKRVSSDFFEGTRARLVEKDFAPKWDPPSLKEVPEDMVEHYFSPFDEVESELELPTTLREPYV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0919 402 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 12 401 IPR032259 GO:0003860
Sto5g0919 402 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 12 401 - -
Sto5g0919 402 SUPERFAMILY ClpP/crotonase 51 367 IPR029045 -
Sto5g0919 402 Pfam Enoyl-CoA hydratase/isomerase 49 381 IPR045004 -
Sto5g0919 402 Gene3D - 33 397 - -
Sto5g0919 402 CDD crotonase-like 51 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0919 Sto-Chr5 6210256 6216016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0919 1 401 Acyl Lipid Metabolism Gene Families AT4G31810 68.627 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0919 K05605 - gmx:100808892 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0919 5 6210256 6216016 Sto5g0919 5 6210256 6216016 ECH