Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0892 ATGGAGCCGGACGTGAGTATTGAGAGCTCGTCGATGATCCAGGTGGCGGTGCTGCCGATCGGGACGGTGCCGCCGAATATGCTGCGGGACTATTATTCTATGCTGCTACCTCTCCATATCATACCACTCTCGGCCATTAGTTCCTTCTATACAGAGCACCAGAAATCTCCGTTTGCTCATCAACCATGGGACTCGGGGTACCTCCGGTTCAAATTCGTTCTGGGAGGTGCACCTCCAAGCCCATGGGAGGACTTTCAATCTCACCGTAAAACTCTCGCTGTTATAGGCATTTGCCATTGCCCTTCCTCACCTGATCTTGATTCTGTCATCGATCAATTTTCTAATTCCTGCAAGTCCTACCCTTCCTCGCTTGTGGATCGCTGCTTTGCATTCTGCCCAGATGATTCGCAGCTTGAGGATGGAAGTAGAAAGGGGGGTAATTTAAGGTTGTTTCCGCCTGCTGATCGTCAAACACTGGAATTCCACTTGAACACTATGATGCAAGAAGTTGCTGCCTCGTTGTTGATGGAGTTTGAAAAGTGGGTGCTTCAGGCTGAATCATCAGGCACCATACTCAAGACACCTTTAGATTCTCAAGCGAGTCTCAGCTCAGAGGAGGTTATTAAGGCTAAAAAACGAAGACTTGGGCGTGCACAGAAGACCATAGGTGATTACTGCTTACTGGCCGGTTCGCCAGTTGATGCAAATGCCCATTATACTACTGCATTGGAACTTGCCAGGTTGACCGGTGATTACTTCTGGTATGCTGGAGCACTAGAGGGTGGAGTTTGCGCCCTGCTGATTGATCGCATGGGCCAGAAAGACGTTGTCTTGGAAGAGGAAGTTAGATACCGTTACAACAGTGTAATCTTGAATTACAAGAAGTCACAAGATAATGCTCAGAGAGTTTCTCCCCTAAGTTTTGAACTTGAAGCTACTTTGAAATTGGCAAGGTTTCTCTGTAGGAGAGAGTTGGCCAAGGAGGTGGTGGAGTTGTTGACCAATGCTGCTGACGGTGCTAAATCTTTGATAGATGCCAGTGATAGACTCATATTGTTTGTTGAAATAGCACGTTTATATGGTAGTCTTGGTTACCAGAGAAAAGCTGCTTTTTTCACAAGGCAGGTTGCTCAGTTATATCTGCAGCAAGATAATCGACTGGCTGCAATTAGTGCTATGCAAGTTTTGGCGATGACCACTAAAGCATATCATGTTCAAAGTAGAGCATCAATCTGTGAAAATTCTCAGCATAATAAGGGAACTGGATCAAGTAATGCAGATAGTGGGAAAAAACACCACCAATCAGCAGTCTCGCTATTTGAGTCTCAGTGGAGTACCCTCCAGATGGTGGTATTAAGAGAAATTCTGCTGTCTGCTGTTCGTGCTGGAGATCCTCTTGCTGCATGGAGTGCGGCAGCAAGACTTCTCAGATCCTATTATCCTCTTATAACTCCTGTTGGGCAAAATGGCCTAGCTAATGCACTAACAAATTCAGCTGAGAGGTTGCCACCGGGGACTCGTTGTGCTGATCCTGCCTTACCTTTTATAAGGTTACATTCTTTTCCCCTCCACCCAACACAAATGGACATCATAAAACGAAATCCAGCTAGAGAAGACTGGTGGGCAGGTTCTGCTCCTTCGGGCCCTTTCATTTATACACCATTTAGCAAAGGAGAGACTAATAATATTAAGAAGCAGGAGCTTATTTGGATTGTTGGAGAGCCTGTCCAGGTCTTGGTGGAACTGGCAAACCCATGTGGCTTTGATTTGAAGGTTGATAGCATCTATTTGTCTGTGCATTCAGGAAACTTTGATGCTTTCCCTGTGATTGTTAGCCTTCCACCAAATTCGTCGAAAGTGATTACCTTATCAGGCATTCCAACATCTGTGGGACTAGTTACAATTCCTGGGTGCATTGTTCATTGTTTTGGTGTTATTACTGAACACCTATTCAAAGATGTTGACAATCTGCTTCTTGGAGCCTCGCAAGGACTTGTCCTTTCTGACCCTTTCCGCTGCTGTGGATCTCCAAAGTTGAAGAATGTATCTGTTCCAAATATTTCTGTTGTACCGCCACTTCCATTGCTGGTGTCACGTGTTGTTGGGGGTGATGGTGCCATCATTTTGTATGAAGGTGAAATTCGTGACATATGGATAAGTGTGGCTAATGCTGGCACAGTTCCAATTGAGCAAGCACATATTTCACTGTCAGGAAAAAATCAAGATTCTGTACTGTCATATTCTTGTGAAACTTTAAAATCTTGCCTCCCACTAAAGCCTGGAGCAGAAGTGACTTTACCGGTGACCTTGCGAGCCTGGCAGGTTGGCTTAGTGGACCCTGATGCTGGTGCTGGGAAGAGTGCCTCTGGAAGCATTATGAGGCATTTCAAAGAGGGAATCAGCCCATCATTATTGATACATTATGCTGgtccACTGCAAACCTCTGGAGATACTCCAACAAATGGATCTACTGTGCCCCCTGGTAGGCGCCTTGTTGTTCCTCTGCATATTTGTGTTTTGCCAGGTTTGTCTTTTGTTAAGGCTCGGTTGCTTTCAATGGAGTTTCCTGCACATGTTGATAATAACTCCAATGGAGGACATGTTGACTCTCAGTCAAAAATGGAtagattggtgaaaattgatccTTTTAGAGGAAGTTGGGGATTGAGATTTCTTGAACTTGAGCTATCTAATCCAACTGATGTTGTGTTTGAAATTAGTGTCTCTGTCAAACTGGAGAACTCTAGTGATGAGGATAATGTTTCAGCTAGCCAGGATGCTTCTGAATATGGCTATCCTAAAACAAGAATTGATAGGGATTGCTCAGCCAGGGTTCTAGTGCCTCTAGAGCATTTTAAACTGCCTGTTCTTGATGATTCATTTTTTATGAAGGATGCTCAGACAGATGGGGTTAGTGGAGGCAGGCATGCAACGTTCTCTGAGAAGAATACCAAAGCTGAACTCAATGCGTGTATCAAGAACCTTATATCTAGAATTAAAGTTCGATGGCATTCAGGACGCAATAGTGCTGGAGAGTTAAATATTAAGGATGCTATTCAGGCTGCTCTTCAGACATCAATTATGGATGTACTGCTGCCTGATCCATTGACCTTTGGCTTTAGGCTTGTCAGAAATGGTCTTGAATCACAAAACTCTGATCCTGACAAAGAATCCAATACTGATGTGGAGTCTCCCACATCAAAAGATTCTGTGCTTGCACATGAAACGACACCAATGGAGGTTCTTGTTCGTAATAACACAAAGGATCTGATCAAGATGAGTCTTAATATTACTTGTAGAGATGTAGCTGGGGAAAATTGTGTAGATAGTTCCAAGGCAACTGTTCTATGGACTGGTGTTCTAAATGATATTACTATGGAGATCCCCCCACTTCAAGAAACCAAACATTCTTTCTGCTTGTATTTTCTTGTTCCGGGAGAGTATACCCTTACAGCAGCTGCAGTGATCAATGATGCAAATGACATTCTTAGGACTCGAGCCAGGACAAATTCAGCCGATGAGCCAATTTTCTGTCGTGGACCACCATATCACGTTCGCGTTCTTGGGACTGCATGA 3576 0.4404 MEPDVSIESSSMIQVAVLPIGTVPPNMLRDYYSMLLPLHIIPLSAISSFYTEHQKSPFAHQPWDSGYLRFKFVLGGAPPSPWEDFQSHRKTLAVIGICHCPSSPDLDSVIDQFSNSCKSYPSSLVDRCFAFCPDDSQLEDGSRKGGNLRLFPPADRQTLEFHLNTMMQEVAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYTTALELARLTGDYFWYAGALEGGVCALLIDRMGQKDVVLEEEVRYRYNSVILNYKKSQDNAQRVSPLSFELEATLKLARFLCRRELAKEVVELLTNAADGAKSLIDASDRLILFVEIARLYGSLGYQRKAAFFTRQVAQLYLQQDNRLAAISAMQVLAMTTKAYHVQSRASICENSQHNKGTGSSNADSGKKHHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLAAWSAAARLLRSYYPLITPVGQNGLANALTNSAERLPPGTRCADPALPFIRLHSFPLHPTQMDIIKRNPAREDWWAGSAPSGPFIYTPFSKGETNNIKKQELIWIVGEPVQVLVELANPCGFDLKVDSIYLSVHSGNFDAFPVIVSLPPNSSKVITLSGIPTSVGLVTIPGCIVHCFGVITEHLFKDVDNLLLGASQGLVLSDPFRCCGSPKLKNVSVPNISVVPPLPLLVSRVVGGDGAIILYEGEIRDIWISVANAGTVPIEQAHISLSGKNQDSVLSYSCETLKSCLPLKPGAEVTLPVTLRAWQVGLVDPDAGAGKSASGSIMRHFKEGISPSLLIHYAGPLQTSGDTPTNGSTVPPGRRLVVPLHICVLPGLSFVKARLLSMEFPAHVDNNSNGGHVDSQSKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEISVSVKLENSSDEDNVSASQDASEYGYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDAQTDGVSGGRHATFSEKNTKAELNACIKNLISRIKVRWHSGRNSAGELNIKDAIQAALQTSIMDVLLPDPLTFGFRLVRNGLESQNSDPDKESNTDVESPTSKDSVLAHETTPMEVLVRNNTKDLIKMSLNITCRDVAGENCVDSSKATVLWTGVLNDITMEIPPLQETKHSFCLYFLVPGEYTLTAAAVINDANDILRTRARTNSADEPIFCRGPPYHVRVLGTA 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0892 1191 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1189 IPR013935 -
Sto5g0892 1191 PANTHER TRAPP II COMPLEX, TRS120-RELATED 1 1189 - -
Sto5g0892 1191 MobiDBLite consensus disorder prediction 1049 1073 - -
Sto5g0892 1191 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 275 IPR013935 -
Sto5g0892 1191 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 741 IPR013935 -
Sto5g0892 1191 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 188 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0892 K20306 - gmx:100784850 2064.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0892 5 5974864 5982757 Sto5g0892 5 5974864 5982757 ECH