Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0877 ATGAAGATTTCTCATAAACACTTGTTCGCTGTAGTTTACTCGCTGCTTGCGATGTCCATCATCGTCATTACGTTTCTTCCAATTCCAGGCCAGTTATTTGTTCGGATCACACTCGATGGAATGTATTCCGGCTATAACATACGGATAAGTCAGGTTCAATTGACGGTTCCTCGTGAAAAAGTGTTCCAAGCTGTTGTTTCCGATGATCTTCACCGGAACAAATCCAGTTATCCAATGGTAACTAGGACAGAAAAAGTACTATTGAGCAGAGAACAAAAGCTTGAAAAAGGACTCGCCGGAGCAAGAGCTGCGATTCGCAGGGCAGGAGCAGATAGGAGAAGCAATCTCTCTTTGATTTCCACCGATAACAGCGGTTACATTCCGGCCGGAGATATATATCATAACCCCCGCTTATTTCACCAGAGCTATATGGAGATGGAGAAAAGATTCAAGGTGTACGTTTATCAAGAAGGGGAACCACCAATTGTACATTATGGTCCGTGCAAAGACATTTACTCAATTGAAGGAAGGTTCCTCCATGAGTTGGAACACGGCGTTGGGAGATTTAGGACCAATAATCCTAATGCAGCTCACGTATACTTCCTGCCATTCAGTGTGACCTGGATGGTCAAGTACTTCTATACTCCACTCACGAACGATCTCAGCCCTTTAAGGCGGTTTGTCTCCGATTACGTGAGAGTGGTGTCTAGTAGGTACCCCTATTGGAATAGAACTCATGGTGCTGACCACTTCATGCTTGCCTGTCATGATTGGGGTCCTCATGCATCAGAAGGCAACCCTTTCCTCTACAATACGTCCATCCGGGTCTTGTGCAATGCCAACACTACCGAAGGCTTCAACCCTCGAAAGGATGTAAGTCTACCAGAAATCCATCTTTACGGAGGTAAAGTATCCCCCAAATTCCTTTCACCCCCACCGGAAAACATTTCGCGTCCCCATCTAGCCTTTTTTGCCGGTGGATTGCACGGCCCAATCCGACCCATCCTCCTCCATCACTGGAAAAACCGGGACAATGATGTTCTCGTCTACGAATACCTCCCAAAATACCTAGATTATGACTCCTTCTTGCTCAGCTCCAAGTTTTGTCTTTGTCCAAGTGGGTACGAAGTGGCTAGCCCTAGAATCGTGGAGGCAATCTACGCGGAATGCGTGCCGGTGATTCTATCGGAGAAATATGTGTTGCCGTTTAGTGATGTGCTGAGATGGGAATCGTTCTCAGTGCAGGTTGATGTTTCGGATATTCCAAGATTGAAAGAGATACTCAGTGCAATTCCGGAGAACAAGTATCGGAAGTTGAAGGAGAGTTTAAGGGCTGTAAGGAGGCACTTTACGTTAAATCACCCGGCTAAGAGATACGATGTCTTTCACATGATATTACACTCCATATGGCTAAGGAGATTAAACGTGAGACTCGGATAA 1440 0.4576 MKISHKHLFAVVYSLLAMSIIVITFLPIPGQLFVRITLDGMYSGYNIRISQVQLTVPREKVFQAVVSDDLHRNKSSYPMVTRTEKVLLSREQKLEKGLAGARAAIRRAGADRRSNLSLISTDNSGYIPAGDIYHNPRLFHQSYMEMEKRFKVYVYQEGEPPIVHYGPCKDIYSIEGRFLHELEHGVGRFRTNNPNAAHVYFLPFSVTWMVKYFYTPLTNDLSPLRRFVSDYVRVVSSRYPYWNRTHGADHFMLACHDWGPHASEGNPFLYNTSIRVLCNANTTEGFNPRKDVSLPEIHLYGGKVSPKFLSPPPENISRPHLAFFAGGLHGPIRPILLHHWKNRDNDVLVYEYLPKYLDYDSFLLSSKFCLCPSGYEVASPRIVEAIYAECVPVILSEKYVLPFSDVLRWESFSVQVDVSDIPRLKEILSAIPENKYRKLKESLRAVRRHFTLNHPAKRYDVFHMILHSIWLRRLNVRLG 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0877 479 PANTHER XYLOGALACTURONAN BETA-1,3-XYLOSYLTRANSFERASE 68 477 - -
Sto5g0877 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 68 477 IPR004263 GO:0006486|GO:0016757
Sto5g0877 479 Pfam Exostosin family 147 430 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0877 Sto-Chr5 5862178 5864981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0877 - - gmx:100820065 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0877 5 5862178 5864981 Sto9g3322 9 33188474 33189481 CCT
Sto5g0877 5 5862178 5864981 Sto5g0877 5 5862178 5864981 ECH