Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0876 ATGAAGCACACTTCATCGGAGGCAGTCTCGTCTTCATCTTCTGTACCCTCTTTAACAGACCAATATCAGGCTGCCACCTCATCGTCGGCGGCTGCAGAGGACTTGGCTATGGGTTCTAGGGACGGAGGCGGCGCCCATGAGACCGTCACCGTCGATCGCCGGGGCGAGTATTCCGCCGTTTGCCGGTGGACGGTACATAATTTTCCGAGAATAAAAGCTAGGGCACTGTGGAGCAAGTACTTCGAGGTCGGAGGCTATGATTGCCGTCTCTTAATATATCCTAAGGGTGACTCCCAGGCTTTGCCAGGATACATCTCTATCTACCTCCAAATCATGGACCCTCGGGGAAGTTCGTCGTCTAAATGGGACTGCTTTGCTAGCTATCGATTAGCAATCATGAATGTCGCCGACGATTCCAAGACCATTCATCGAGACTCGTGGCACCGGTTCTCAAGTAAGAAGAAATCGCACGGATGGTGTGATTTTACGCCTTCATCAACTGTATTTGATCCGAAATTGGGTTATTTGTTCAATAATGATTCCGTATTGATAACAGCTGACATTCTTATTCTTAATGAGTCTGTTAATTTCACTCGAGAGAACAATGAGGTTCAGTCATcggcatcatcatcatcatctatgaTATCCTCGTCTGTTGTTACGGGCCCAGTGTCCGATGTATTGAGTGGGAAATTCACTTGGAAAGTGCATAATTTTAGTTTGTTTAAGGAGATGATAAAAACACAAAAGATAATGAGCCCGGTTTTCCCTGCTGGGGAGTGTAATTTGAGGATCAGTGTGTATCAGAGCTCAGTTAATGGGGTCGATTATCTGTCAATGTGTTTGGAAAGCAAGGATACGGATAAAACGGTGATATTGTCTGATAGGAGTTGCTGGTGTTTATTTCGAATGTCAGTCTTGAACCAGAAGCCAGGCTCCAATCACATGCATAGGGATTCATATGGGCGTTTTGCAGCTGATAATAAGAGTGGTGACAATACCAGTTTGGGTTGGAATGATTATATGAAGATGTTGGATTTTATTGGGCCTGATTCAGGGTTCCTGGTGGATGACACTGCAGTTTTTAGTACATCATTTCATGTGATCAAGGAGTTTAGTAGCTTCTCTAAAAATGGAGCTTTAATTGCAGGGAGAAGTGGGAGTGGTGCGAGGAAATCAGATGGTCATATGGGAAAGTTCACGTGGAGGATTGAAAATTTCACTAGGTTGAAGGATTTattgaagaaaaggaaaattacaGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGTAATAGGGATTGTCGTCTCATTGTTTATCCCCGAGGGCAGTCTCAACCACCATGCCACCTTTCAGTTTTTCTTGAAGTTACAGATTCGAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGGTTGTCAGTTGTGAATCAGAAGATGGAAGAGAAATCTGTCACCAAGGAATCCCAGAACCGCTACTCCAAGGCTGCAAAGGATTGGGGCTGGCGTGAATTTGTGACACTTACAAGTCTTTTTGATCAAGATTCAGGTTTTCTAGTCCAGGATACTGTTGTGTTCTCAGCAGAAGTTCTTATATTGAAAGAGACATCAATAATTCAGGATTTTGCTGATTATGAGTCTGAGTTAAGTAGTAGTGGTTCCCTTATTGATAGGTATCAGAAAAGAAGTTCATTTACATGGAAAGTGGAGAATTTCTTGTCCTTTAAGGAAATAATGGAGACTAGAAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGGATTGGTAGTGTTGTCTGTGACACAGGTGTTTATGAGTCCTTTGACACcatatgtatttatttagaGAGTGACCAGGCTGTTGGTAGTGATCCAGATAAAAACTTTTGGGTTAGATACAGGATGGCTGTTGTGAATCAAAAGAATCCAGCCAAGACAGTGTGGAAGGAATCTTCTATCTGTACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATGTTGGAAGCAGATGCAGGGTTTCTTGTCCGTGACACTGTTGTTTTTGTGTGTGAAATATTGGATTGCTGCCCTTGGTTTGAGTTTTCAGACTTAGAGGTTTTAGCCTCAGAGGATGATCAGGATGCTTTGACAACGGATCCTGATGATCTCATTGACTCTGAAGATAGCGAAGGAATAagtggagatgaagaagataTTTTCAGAAATCTTCTTTCGCGAGCTGGATTTCACCTAACATATGGAGATAATCCTTCTCAGCCACAGGTCACTTTAAGAGAAAAACTTTTAATGGATGCTGGTGCAATTGCTGGGTTTTTAACTGGACTCCGGGTTTATCTTGATGATCCTGCAAAAGTAAAGCGTTTGCTTCTTCCAACCAAGCTCTCTAGTAGTTGTGATGGGAAAAAGGTCACCAAGGCTGATGAGTCTAACCCCAGTTTGATGAATTTACTGATGGGAGTTAAAGTGTTGCAGCAGGCCATCATTGATTTGCTTTTGGATATAATGGTGGAGTGCTGCCAACCTTCTGAAGGGGATTCTGTTTCTGATTCTCTCAATGTATTAAAACCTTCTGTGGAGAGCAATGGAGCTGCTATTCCTCTTGAATCTGATAGAGAAAATGGAGCAACAGAATCTGTGCAATTTCCTGTTTACGAAAGATTGGATTCTGTTGCTGACAATAGTAGTAACACGTCTGCAGTTCAAAGCTCTGATTTAAGGGGTGATTGTATTCAGGAAAAAACTTTTCTTGGACAGCCTATTTGTCCTCCAGAAACATCTGCTTCTGGTTCGGACAATGCATCCTTTCGGTCAAAGACCAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTAAACTCACTTAGAACCTTGGATGGGGCTGTTCCACAAGGCTGTCCTGAGCCAAGACGGCGGCCTCAATCTGCACAGAAAATTGCACTTGTATTAGACAAAGCACCTAAGCATTTGCAAGCAGACCTGGTTGCTCTAGTACCCAAATTGGTTGAGCATTCAGAACATCCACTAGCAGCCTTTGCACTTCTTGAGCGACTTCAAAAGCCAGATGCAGAACCTGATTTACGAATACCTgTTTTTGCGGCTCTTAGTCAACTGGAGTGTGGTAGTGAAGTGTGGGAACGGGTTCTGTTCCAATCATTTGAGCTTTTGACAGATTCGAATGATGAACCCCTTGCCAAAACCATAGATTTTATATTCAAAGCAGCATCTCAATGCCAACATCTTCCTGAAGCAGTTAGATCTGTTCGCATCAGGCTAAAAAATCTAGGTCTTGAAGTGTCACCTTTTGTCCTTGACTTTTTGAGTAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATACTGAGGGACATTGATTGTTCTGATGATTATGGTGATAGTTGCTCAGGGATGCCTTGTGGGCTTTTCTTAGTTGGTGAACACAGAACGGCTCCTACTGGATTGCACGTGGTTGATGAGCAGGCTTTCCAAGCTAGTCATCATTTTTCTGATATATATGTCCTGATTGAGATGTTATCTATACCTTGTCTTGCTGTCGAAGCTTCTCAAACTTTTGAGAGAGCTGTAGCTCGAGGTGCAATTGGTGCTCAGTCTGTAGCTTTGATATTGGAAAGGCGCCTTTCCCAAAGATTGAATAATAATGTCAGATGTGATGCAGAAAATTTTAACCATTCAGATGCTGTAGTAGATGGAGATGCTGATGAGCAATTAGGAGTTCAAAGGGATGATTTTGCTTCAGTTCTTGGTCTTGCTGAAACATTGGCCCTTTCTAGGGATCCATGTGTGAAAGAATTTGTAAAATTGCTTTACATGATATTGTTTAGATGGTATGCCAATGAATTTTATCGGGGAAGGATGCTGAAGAGGCTTGTTGACCGCGCCACCAGCACTACAAATAATAGTCGTGAAGTAGATTTGGAATTGGATATCTTGGTTACTTTGGTTTGTGAGGAGCAGGAAATTATTAGACCTGTTTTGAGCATGATGCGTGAAGTTGCTGAACTTGCAAATGTTGATCGGGCTGCTCTATGGCACCAGTTGTGTGCTAGTGAGGATGAAATCATTCGTGTTCGTGAAGAAAGGAAAGCCGAGATTTCTAATTTAGTTAGGGAAAAAGCTATTATGTCACAAAAGCTGAGTGACTCTGAGGCTGCCAACAACCGTCTCAAGTCTGAAATGAGGGCTGAGATGGATCGATTTGCTCGGGAAAAGAAGGAACTATTAGAACAAGTACAAGAAGTTGAGAGTCAGCTTGAGTGGCTTCGCTCAGAGCGAGATGATGAAATGGCAAAGCTCTCTGCGGAGAAGAAAGCGCTTCAGGACCGTCTGCATGATGCAGAGGCACAACTTTCACAATTGAAGTCCCGCAAACGTGATGAATTAAAGAAAGTAGTCAAGGAGAAAAATGCTCTTGCTGAAAGATTGAAGACTGCAGAAGCTGCAAGGAAGAGATTTGATGAAGAACTGAAAAGATATGCAACAGAAAATGTGACTCGGGAAGAAATCCGAAAATCACTTGAGGATGAAATTCGTATATTGACACAAACAGTTGGGCAAACCGAGGAAGAAAAGCTAGAGAAGGAAAAGCAGGTTGCAAGGTGTGAAGCATATATTGATGGCATGGAATCAAAATTGCAGACCTGCGAGCAATATATTCACACGCTTGAGGCTTCACTACAGGAGGAAATGACACGTCATGCCCCTCTATATGGTGCTGGTCTGGAGAGACTGTCAATGAAAGAGTTGGAAACACTATCTCGTATTCATGAAGAAGGGCTGAGGCAGATCCATGCCCTTCAACAGCGTAAGGGTAGTCCTGCCGGCAGTCCTCTTATGAGTCCCCATGGCCTCCCACACAGCCATGCAGGATTATATCCCTCTGCATCGCCTCCAATGACCGTTGGCCTTCCACCCTCACTCATTCCTAATGGGGTGGTAGGTATTCACACCAATGGCCATGTGAATGGTGCAGTAGGACCTTGGTTTAACCACACTTGA 5055 0.4249 MKHTSSEAVSSSSSVPSLTDQYQAATSSSAAAEDLAMGSRDGGGAHETVTVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGSSSSKWDCFASYRLAIMNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNNDSVLITADILILNESVNFTRENNEVQSSASSSSSMISSSVVTGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVDYLSMCLESKDTDKTVILSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMLDFIGPDSGFLVDDTAVFSTSFHVIKEFSSFSKNGALIAGRSGSGARKSDGHMGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFSAEVLILKETSIIQDFADYESELSSSGSLIDRYQKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGSVVCDTGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDDLIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSSSCDGKKVTKADESNPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGDSVSDSLNVLKPSVESNGAAIPLESDRENGATESVQFPVYERLDSVADNSSNTSAVQSSDLRGDCIQEKTFLGQPICPPETSASGSDNASFRSKTKWPEQSEELLGLIVNSLRTLDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEHSEHPLAAFALLERLQKPDAEPDLRIPVFAALSQLECGSEVWERVLFQSFELLTDSNDEPLAKTIDFIFKAASQCQHLPEAVRSVRIRLKNLGLEVSPFVLDFLSKTINSWGDVAETILRDIDCSDDYGDSCSGMPCGLFLVGEHRTAPTGLHVVDEQAFQASHHFSDIYVLIEMLSIPCLAVEASQTFERAVARGAIGAQSVALILERRLSQRLNNNVRCDAENFNHSDAVVDGDADEQLGVQRDDFASVLGLAETLALSRDPCVKEFVKLLYMILFRWYANEFYRGRMLKRLVDRATSTTNNSREVDLELDILVTLVCEEQEIIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRVREERKAEISNLVREKAIMSQKLSDSEAANNRLKSEMRAEMDRFAREKKELLEQVQEVESQLEWLRSERDDEMAKLSAEKKALQDRLHDAEAQLSQLKSRKRDELKKVVKEKNALAERLKTAEAARKRFDEELKRYATENVTREEIRKSLEDEIRILTQTVGQTEEEKLEKEKQVARCEAYIDGMESKLQTCEQYIHTLEASLQEEMTRHAPLYGAGLERLSMKELETLSRIHEEGLRQIHALQQRKGSPAGSPLMSPHGLPHSHAGLYPSASPPMTVGLPPSLIPNGVVGIHTNGHVNGAVGPWFNHT 1684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0876 1684 PANTHER TRAF-LIKE FAMILY PROTEIN 25 1684 - -
Sto5g0876 1684 MobiDBLite consensus disorder prediction 932 950 - -
Sto5g0876 1684 Pfam MATH domain 67 190 IPR002083 GO:0005515
Sto5g0876 1684 Pfam MATH domain 429 535 IPR002083 GO:0005515
Sto5g0876 1684 SMART math_3 60 168 IPR002083 GO:0005515
Sto5g0876 1684 SMART math_3 234 347 IPR002083 GO:0005515
Sto5g0876 1684 SMART math_3 402 514 IPR002083 GO:0005515
Sto5g0876 1684 CDD Prefoldin 1402 1539 - -
Sto5g0876 1684 ProSiteProfiles MATH/TRAF domain profile. 58 188 IPR002083 GO:0005515
Sto5g0876 1684 SUPERFAMILY TRAF domain-like 566 697 - -
Sto5g0876 1684 CDD MATH 398 533 IPR002083 GO:0005515
Sto5g0876 1684 ProSiteProfiles MATH/TRAF domain profile. 397 533 IPR002083 GO:0005515
Sto5g0876 1684 PANTHER TRAF-LIKE FAMILY PROTEIN 25 1684 - -
Sto5g0876 1684 CDD MATH 62 188 IPR002083 GO:0005515
Sto5g0876 1684 SUPERFAMILY TRAF domain-like 227 372 - -
Sto5g0876 1684 SUPERFAMILY TRAF domain-like 398 539 - -
Sto5g0876 1684 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 557 698 IPR008974 GO:0005515
Sto5g0876 1684 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 225 372 IPR008974 GO:0005515
Sto5g0876 1684 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 44 195 IPR008974 GO:0005515
Sto5g0876 1684 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 388 542 IPR008974 GO:0005515
Sto5g0876 1684 SUPERFAMILY TRAF domain-like 57 196 - -
Sto5g0876 1684 CDD MATH 230 362 IPR002083 GO:0005515
Sto5g0876 1684 MobiDBLite consensus disorder prediction 1621 1644 - -
Sto5g0876 1684 Coils Coil 1522 1542 - -
Sto5g0876 1684 ProSiteProfiles MATH/TRAF domain profile. 229 366 IPR002083 GO:0005515
Sto5g0876 1684 ProSiteProfiles MATH/TRAF domain profile. 565 696 IPR002083 GO:0005515
Sto5g0876 1684 CDD MATH 567 696 IPR002083 GO:0005515
Sto5g0876 1684 Coils Coil 1398 1514 - -
Sto5g0876 1684 Gene3D - 1440 1632 - -
Sto5g0876 1684 MobiDBLite consensus disorder prediction 931 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0876 Sto-Chr5 5847109 5856199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0876 - - ccaj:109798115 2909.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0876 5 5847109 5856199 Sto5g0876 5 5847109 5856199 ECH