Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0864 ATGGCGCCAAGCACGATTCGAAAGGCAATTGGGGCGGTTAAGGATCAGACTAGTATTGGTATAGCCAAGGTAGCTAGCAACATGGCGCCGGAACTTGAGGTTGCCATTGTGAAGGCGACCAGTCACGACGATGACCCTGCCAGCGAGAAATACATCCGCGAGATCTTGAGCTTAGTGTCTTATTCTCGAGGCTACGTTCATGCGTGTGTGTCTGCTGTGTCCAAGCGTTTGGGGAAGACCCGGGATTGGATGGTGGCGCTCAAGGCTCTCATGCTTGTGCACAGGTTGATGAATGATGGTCCTCCTCTTTTTCAAGAGGAGATCTTATATGCCACCAGGAGGGGAACCAGGCTTCTTAACATGTCTGATTTCAGGGACGAGGCTCACTCCAGCTCCTGGGATCATTCGGCTTTTGTGAGGATCTATGCCATGTATTTGGATCAACGCCTCGAGTTGATGCTGTTCGAGAGGAAAAGTGGGAATGTTGGGGGTGGGAGTGGGAGTGTTGGGGAGAGCCTGGATGATAGATATGGGGGAAGAGACAATTTTAGGTCACCACCACCACGACCGTATGAGTATGAGTATGGAGAGTTCAGGGGGGAAAGTGGGTACCAAAATGGAATGAGGCGGACCCGATCCTTTGGTGATATGAGTGAAACAGTGGGTCGAGAAGGTAAAGAGGAGAAAAGGGTTGTGACTCCGTTGAGAGAGATGAACCCTGAGAGGTTATTTGGCAAGATGGGCCATCTGCAGAGGCTGCTGGATCGTTTCTTGGCTTGTAGGCCTACAGGATTGGCAAAGAATAGTAGGATGATTTTGGTTGCATTGTATCCAGTTGTGAAGGAGAGCTTTCAGCTGTATGCCGATATCTGTGAGGTTTTGGCTGTGTTACTTGACAAATTCTTTGATATGGAATACCCTGACTGTGTTAAGGCCTTTGATGCTTATGCCAGTGCAGCAAAGCAGATCGATGAGCTTGTTGGTTTCTACAATTGGTGTAAGGATATTGGTGTGGCTAGATCATCAGATTACCCAGAAGTTCAGAGGATTACTAGTAAGTTACTGGAGACACTGGAGGAGTTTGTTAGGGATCGGGCGAAGAGGCCAAAAAGTCCAGAGAGGAAGGAGGAAGTTCTACCAGTGCAGAAAGAGGAGGAGTCAGTTCCAGATATGAATGAAATCAAGGCACTACCTCCACCTGAGAATTACACTCCACCTCCACCCCCTGAGCCCGAGCCTGAACCCGAGCCAAAGCAACAAGTTACAGAGGACTTAGTAAATCTGAGAGACGATGCAGTCACTGCAGATGATCAGGGTAATAAACTGGCATTGGCATTGTTTGCTGGTCCACCAGCAAGTAATGGAAATGGATCGTGGGAAGCCTTCCCATCAAATGGACAACCTCAAGTGACTTCCGCTTGGCAAACCCCAGCTGCAGAACCCGGGAAGGCTGATTGGGAATTGGCGTTGGTAGAAACTGCTAGCCATTTATCCCAACAGAAGGCAACTTTAGGTGGTGGGTTTGATCCATTATTACTGAATGGCATGTATGACCAAGGAATGGTCAGGCAGCATGTCAGCACTGCCCAATTGAGTGGTGGGAGTGCAAGCAGTGTAGCATTGCCGGGGCCAGGAAAGAGCACGACACCTGTGTTAGCTCTCCCTGCACCAGATGGATCTGTGCAGCCAGTTAATCAGGACCCGTTTGCGGCATCGTTGAATTTTCCGCCCCCATCATATGTGCAAATGGCAGATATGGAGAAGAAACAACAGTTTCTTGTGCAGGAGCAGCAAATGTGGCAGCAGTATGCAAGTGATGGGATGCGAGGTCAAACTAGCTTGGCCAAAATCGGTGCTATGACCATGATGCCTTATGGAATGCCCCCGGTCAATGGAATGGGACCTCCGGCAGGGTACTACTATACTCactga 1932 0.4938 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPASEKYIREILSLVSYSRGYVHACVSAVSKRLGKTRDWMVALKALMLVHRLMNDGPPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRIYAMYLDQRLELMLFERKSGNVGGGSGSVGESLDDRYGGRDNFRSPPPRPYEYEYGEFRGESGYQNGMRRTRSFGDMSETVGREGKEEKRVVTPLREMNPERLFGKMGHLQRLLDRFLACRPTGLAKNSRMILVALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVGFYNWCKDIGVARSSDYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEVLPVQKEEESVPDMNEIKALPPPENYTPPPPPEPEPEPEPKQQVTEDLVNLRDDAVTADDQGNKLALALFAGPPASNGNGSWEAFPSNGQPQVTSAWQTPAAEPGKADWELALVETASHLSQQKATLGGGFDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGKSTTPVLALPAPDGSVQPVNQDPFAASLNFPPPSYVQMADMEKKQQFLVQEQQMWQQYASDGMRGQTSLAKIGAMTMMPYGMPPVNGMGPPAGYYYTH 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0864 643 SUPERFAMILY GAT-like domain 234 364 - -
Sto5g0864 643 MobiDBLite consensus disorder prediction 365 422 - -
Sto5g0864 643 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 626 IPR045192 GO:0048268|GO:0072583
Sto5g0864 643 MobiDBLite consensus disorder prediction 163 191 - -
Sto5g0864 643 Pfam ANTH domain 31 364 IPR011417 GO:0005543
Sto5g0864 643 MobiDBLite consensus disorder prediction 365 391 - -
Sto5g0864 643 PANTHER - 1 626 - -
Sto5g0864 643 Gene3D ANTH domain 226 380 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Sto5g0864 643 Gene3D - 2 155 IPR008942 -
Sto5g0864 643 MobiDBLite consensus disorder prediction 399 415 - -
Sto5g0864 643 SMART enth_2 30 160 IPR013809 -
Sto5g0864 643 CDD ANTH_N_AP180_plant 32 152 - -
Sto5g0864 643 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Sto5g0864 643 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0864 Sto-Chr5 5780124 5782085 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0864 - - gmx:100803282 1053.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0864 5 5780124 5782085 Sto5g0864 5 5780124 5782085 ECH