Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0835 ATGGAAACGAGAGGAAGAGCCAACGATGAAAGGAATTACAGAAGCAACCATGTAGGTACAGATGTTGAGTTAGTGAATTCCCTAAAACACAAGTTAGAGAGGCTTCCCCTTTTGTCCTCTGAGTGTTGCATATATAGGGCTCCCAAACACCTATTTGAAACAGCCCAAAAATCATTTATACCTAAGATCATATCAATTGGCCCCTTTCATCACAAAAGGGAAGATTTGCAAAAGATGGAAAAGCACAAATTACGTTATCTCAAGGAATTTTTACAACGAAGTGAGGCGAGCCTAGAGGACTGCATCAAACTTGTCCAGAAATCTGAACTCCGGTTGAGGAAATGTTACGCAGAAGCAATTGAGCTTAATCACGTTAGATTTGTGGAGATGATTCTTGTGGATGCTGCTTTCGTTATTGAAGTCCTAGTAAGTATTAGTTTCCCAGAATTGAGAAATTGCGATGACTGGATTCTTGGTAGATCAAGAATGCTATCCGAGATTAGACAGGATATGTTTCTGATGGAGAATCAGCTTCCATTCTTCATCATGGAGGATTTATTAACTCTAGCCAAAGTAAACTTCCCTCCACACAATGATTCCAGAGCTATTCTGATTAGACTTACGCTCAATTTTTTCAAAAGAGCGTTAAGGAGTGACATTGAATACTATATAGAGAAACTACACAATAGCAGAATTGAACACCTTCTAGATTTAGCGAGGAGCTTGGCTTTGCCGCGTGAGTTACCAGTCCAAAGAAAACTGAAAACTTTATCCATACCCAATGTGACACAGCTATATCATTCGGGAGTGAAGTTCAGAGTGATCAAACATGGAAACTTATTTGGCATGCGATTCCAAGAAGGGATTCTTGAGTTTCCATCTCTGTACCTAAGTACTAGGACAGAAACTCTAATGAGGAATCTGAATGCCTTCGAGAGATGCCACTTCAAAGACACATACATGAATAACTTATTCTTCTTGATTGATCGTCTAATAGATAGCCCAAGTGATGTGGAAATACTGATTCACAATCAAATTCTGGAAACGGATGTACCAGATAGCGAGGGGGTGGCAAGCATCATCAACAACCTTGCGACGGGAGCTCCCCTGCTTGATGAGAATTTCTGTTTTGCTGATATTTGTGATGAACTCAATGCGTATTGCAGAGTTCCATGGCATAAATGGAAGGCAACCTTGAAGAGAGAATATCTGAGTACTCCATGGGCTGCTATTTCGCTCACTGCAGTTACGGTTCTtcttttcctcacttttctACAAACTCTATTTACCATATACTCCAGCACatattcattttatatGGAAATGAGAGGAAGAGCCAACGATGAAACCAACAGAGGCAACCATATATGTAAAGATATTGAGAAGTCACTTGAGATAGCCAATTCCTTAAGACAGAAATTAGAGATGCTTCCCCTTTTGTCTTCTGAGTGTTGCATATATAGGGCTCCCAAACACCTACGTGAAAAAGCTCAAAAGTCATTTATACCTAAGATTGTATCAATTGGCCCCTTTCACCACAACAGGGAAGATTTGCAAGACATGGAAAAACACAAGTTACGTTACCTTAAGGAATTTCTACAACGAAGTGAGGTGAGCCTTGAGGACTGCATCAAACTTGTCCACAAATCTGAACTCCGCCTGAGGAATTGTTATGCAGAAGCAATTGAACTTAATCATGTTAGATTTGTGGAGATGATTCTAGTGGATGCCGCCTTCATTATTGAGGTTCTAATGAGGATTAGTTTCCCAGAACTTGGAAATCACCATGACCGGATTCTTGGTAGATCTAGAATGCTATCTTACATAATACAAGATATGCTTCTGCTGGAGAATCAGCTTCCATTCTTCATCATAGAGGATTTATTCACTCTATCTCTAGCCAAAGTAAGCTTTCCTCCACATAATGATGCCAGAGTTATTCTGATTGAACTTTTGCACAAATTTTTGAAAACTGTGTTAATAAGGGACAGAAGATACAATGTGGAAAAAGTATACAGTAGTAGAATTGAACACCTTCTTGATTTTGTGAGGAGCTCTCTTTTGCCACCTGAATTACCTATCCAAGGAAAACTTAAAACTTTATCTATACCCAATGTGACACGACTATATCATTCCGGAGTGAAGTTCAGAGTTGCGGAACATTCATCTTATATACGATTCCATCGGGGGATTCTTGAGATTCCAATTGTATACCTATGTAGTTCATCAGAAACTCTAATAAGGAATATCATTGCCTACGAGAGATGCCACTTCAATGATGCATACATGAATAACTTACTTTTCTTGATTGATCGTCTAATAGATAGCCCAAGTGATGTGGAAATACTGATTCATAATCAAATTCTGGAAACGGATCTACCAGATAGCCAGGGGGCAGCAACCTTCATCAACAACATTTCCCCAGGAGGTACCATACCTGGTGACAAATTCTATCTTGCTGATGTTTGTGATGATCTCAATGCATATTGCAGAGTTCCATGGCACAAGTGGAAGGCAACCCTGAAGAGAGAATACTTTAGTACTCCATGGTCTGCTATTTCAGTCATTGCAGTTACTGTTCTtcttttcctcacttttctACAAACTGTGTTTACTGTCTACTCCAGTAGCTGCCGTTGA 2640 0.3905 METRGRANDERNYRSNHVGTDVELVNSLKHKLERLPLLSSECCIYRAPKHLFETAQKSFIPKIISIGPFHHKREDLQKMEKHKLRYLKEFLQRSEASLEDCIKLVQKSELRLRKCYAEAIELNHVRFVEMILVDAAFVIEVLVSISFPELRNCDDWILGRSRMLSEIRQDMFLMENQLPFFIMEDLLTLAKVNFPPHNDSRAILIRLTLNFFKRALRSDIEYYIEKLHNSRIEHLLDLARSLALPRELPVQRKLKTLSIPNVTQLYHSGVKFRVIKHGNLFGMRFQEGILEFPSLYLSTRTETLMRNLNAFERCHFKDTYMNNLFFLIDRLIDSPSDVEILIHNQILETDVPDSEGVASIINNLATGAPLLDENFCFADICDELNAYCRVPWHKWKATLKREYLSTPWAAISLTAVTVLLFLTFLQTLFTIYSSTYSFYMEMRGRANDETNRGNHICKDIEKSLEIANSLRQKLEMLPLLSSECCIYRAPKHLREKAQKSFIPKIVSIGPFHHNREDLQDMEKHKLRYLKEFLQRSEVSLEDCIKLVHKSELRLRNCYAEAIELNHVRFVEMILVDAAFIIEVLMRISFPELGNHHDRILGRSRMLSYIIQDMLLLENQLPFFIIEDLFTLSLAKVSFPPHNDARVILIELLHKFLKTVLIRDRRYNVEKVYSSRIEHLLDFVRSSLLPPELPIQGKLKTLSIPNVTRLYHSGVKFRVAEHSSYIRFHRGILEIPIVYLCSSSETLIRNIIAYERCHFNDAYMNNLLFLIDRLIDSPSDVEILIHNQILETDLPDSQGAATFINNISPGGTIPGDKFYLADVCDDLNAYCRVPWHKWKATLKREYFSTPWSAISVIAVTVLLFLTFLQTVFTVYSSSCR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0835 879 PANTHER - 12 431 - -
Sto5g0835 879 PANTHER - 460 873 - -
Sto5g0835 879 Pfam Plant protein of unknown function 44 422 IPR004158 -
Sto5g0835 879 Pfam Plant protein of unknown function 486 864 IPR004158 -
Sto5g0835 879 PANTHER BNAC04G53230D PROTEIN 460 873 - -
Sto5g0835 879 PANTHER BNAC04G53230D PROTEIN 12 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0835 Sto-Chr5 5629957 5634820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0835 - - jcu:105632807 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0835 5 5629957 5634820 Sto5g0835 5 5629957 5634820 ECH