Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0829 ATGACAAAGAAGAAGAATCCTCTGGTGTTTATGGATGTCTCTATAGATGGAGACCCTGTTGAAAGGATGATTTTTGAGCTTTTCCATGATGTTGCTCCCAAGACTGCCGAAAATTTCCGTGCACTTTGTACAGGAGAGAAGGGAGTCAGTTCAAGTACTGGCAAGCCATTACACTACAAGGGCTCTTTCTTCCATCGCATTTTAAAAGGCTCCATTGTggagGGGGGTGATTTCGTCAATCGGAACGGTATGTATTCTATTGATGCATTGAATCTCTAA 279 0.4158 MTKKKNPLVFMDVSIDGDPVERMIFELFHDVAPKTAENFRALCTGEKGVSSSTGKPLHYKGSFFHRILKGSIVEGGDFVNRNGMYSIDALNL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0829 92 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 82 IPR002130 GO:0000413|GO:0003755
Sto5g0829 92 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 83 - -
Sto5g0829 92 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 83 - -
Sto5g0829 92 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 92 IPR002130 GO:0000413|GO:0003755
Sto5g0829 92 Gene3D - 1 89 IPR029000 -
Sto5g0829 92 SUPERFAMILY Cyclophilin-like 4 86 IPR029000 -
Sto5g0829 92 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Sto5g0829 92 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0829 Sto-Chr5 5594292 5595169 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0829 K09566 - gmx:100800303 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0829 5 5594292 5595169 Sto5g0829 5 5594292 5595169 ECH