Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto5g0774 | ATGTCTTCGGAATCCAAAGATGCTTCCGTACCGTCGCAATCGGAACAACTAGGGCACGACGATGAAGAAAGCAAATCTGTCAGCAAAAAAGCAGCTAAAAAGGAAGCGGCTAAGCAAGAGAAGCTCCGCCGCCGCCAAGAAGCAGCCCTAGCAAGCGCCACGTCAGCTCTCTCAGTCGATTCAGGGGAAGATCCTCTCGCTGCCAACTACGGCGATGTCCCGCTTTTGGAGCTCCAGTCAAAGACAGCGGCTGATATCAACGTCTGGACGAAAGTTGAAGCCCTCAACAATGCACTGGAGAAGAAGTCCGTTCTGATTCGTGGAAGAGCGCAGACTATCCGCGCTGTCGGAAAAAAAATGGCGTTCATAGTGATAAGGGAGAATGGGTTTACTGCACAGTGTGTGGTGCAGGTCCACCCTGATCACGTGAGCCCTCAGATGGTGAAGTATGCAACTGCATTGAGCCGTGAGTCCATTGTTGATATCGAAGGGGTCGTCTCAGTGCCCGACACTGCTATCAAAGGCGCTTCACAGCAGGTGGAAGTTCAAGTGAGGAAAATATATTGTGTCAGCAGGGCTGTCCCTACACTACCTATTAATATTGAGGATGCTGCTCGaagtgaaattgaaattgagaaAGCTCTTCAGGCTGGTGAACAACTTGTTCGTGTCAATCAGGATACTCGTCTCAACTACAGGGTTCTGGACATTCGAACACCAGCCAATCAAGCAATTTTCCGCATTCAGTCCCAAGTTGGAAATGTATTCAGACAATTCTTATTATCTGAAGGCTTTGTTGAAATTCACACGCCTAAACTGATAGCTGGGTCTAGTGAAGGTGGTGCTGCTGTTTTTAGATTGGATTACAAAGGGCAAGCTGCTTGCCTTGCCCAATCTCCTCAGCTTCACAAGCAAATGGCAATTTGTGGTGATTTTGGCCGTGTTTTCGAGGTTGGTCCGGTTTTTAGAGCAGAAGATTCCTTCACTCACAGACATCTCTGTGAGTTTACAGGTCTTGACGTTGAAATGGAGATTAAGAAGCATTATTTTGAGGTCATGGATATAGTTGATAGGTTATTTGTGGCCATGTTTGATAGTTTAAACAAGAATTGTGAGAAGGATCTGGAAGCTGTGGGAAGGCAATACCCATTTGAACCTTTAAAGTATTTGCGCAAGACTTTGCGACTTACTTATGAAGAAGGGATTCAGATGCTCAAGGATGCTGGTGTAGAAATTGACCCACTTGGTGACTTGAATACTGAATCTGAAAGGAAACTGGGTCAGCTAGTTTTGgagaaGTATGGCACTGAGTTCTACATCCTTCATCGTTACCCGCTAGCTGTAAGGCCATTTTACACAATGCCTTGTTATGACAATCCAGCATACAGTAACTCATTTGATGTCTTTATACGAGGCGAGGAGATAATTTCAGGAGCTCAGCGTGTCCATGTGCCTGAATTCTTGGAAAAACGTGCAGAGGCATGTGGGATTGATGTCAAGACAATATCTACATATATCGATTCTTTCAGATATGGTGCACCCCCACACGGTGGATTTGGAGTAGGGTTGGAGCGTGTAGTGATGCTCTTCTGTGGTCTCAATAACATTCGCAAAACATCGCTCTACCCGCGTGACCCACTTAGAATTGCACCTTGA | 1656 | 0.4553 | MSSESKDASVPSQSEQLGHDDEESKSVSKKAAKKEAAKQEKLRRRQEAALASATSALSVDSGEDPLAANYGDVPLLELQSKTAADINVWTKVEALNNALEKKSVLIRGRAQTIRAVGKKMAFIVIRENGFTAQCVVQVHPDHVSPQMVKYATALSRESIVDIEGVVSVPDTAIKGASQQVEVQVRKIYCVSRAVPTLPINIEDAARSEIEIEKALQAGEQLVRVNQDTRLNYRVLDIRTPANQAIFRIQSQVGNVFRQFLLSEGFVEIHTPKLIAGSSEGGAAVFRLDYKGQAACLAQSPQLHKQMAICGDFGRVFEVGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYFEVMDIVDRLFVAMFDSLNKNCEKDLEAVGRQYPFEPLKYLRKTLRLTYEEGIQMLKDAGVEIDPLGDLNTESERKLGQLVLEKYGTEFYILHRYPLAVRPFYTMPCYDNPAYSNSFDVFIRGEEIISGAQRVHVPEFLEKRAEACGIDVKTISTYIDSFRYGAPPHGGFGVGLERVVMLFCGLNNIRKTSLYPRDPLRIAP | 551 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto5g0774 | 551 | MobiDBLite | consensus disorder prediction | 16 | 47 | - | - | |
| Sto5g0774 | 551 | Gene3D | - | 62 | 196 | IPR012340 | - | |
| Sto5g0774 | 551 | Coils | Coil | 29 | 49 | - | - | |
| Sto5g0774 | 551 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Sto5g0774 | 551 | MobiDBLite | consensus disorder prediction | 1 | 47 | - | - | |
| Sto5g0774 | 551 | CDD | AspRS_cyto_N | 104 | 203 | - | - | |
| Sto5g0774 | 551 | Gene3D | Bira Bifunctional Protein; Domain 2 | 198 | 551 | IPR045864 | - | |
| Sto5g0774 | 551 | Pfam | tRNA synthetases class II (D, K and N) | 226 | 545 | IPR004364 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Sto5g0774 | 551 | TIGRFAM | aspS_nondisc: aspartate--tRNA(Asn) ligase | 93 | 551 | IPR004523 | GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 | |
| Sto5g0774 | 551 | Pfam | OB-fold nucleic acid binding domain | 104 | 188 | IPR004365 | GO:0003676 | |
| Sto5g0774 | 551 | PANTHER | ASPARTYL-TRNA SYNTHETASE | 20 | 551 | IPR004523 | GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 | |
| Sto5g0774 | 551 | PRINTS | Aspartyl-tRNA synthetase signature | 296 | 308 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Sto5g0774 | 551 | PRINTS | Aspartyl-tRNA synthetase signature | 313 | 326 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Sto5g0774 | 551 | PRINTS | Aspartyl-tRNA synthetase signature | 466 | 482 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Sto5g0774 | 551 | PRINTS | Aspartyl-tRNA synthetase signature | 506 | 520 | IPR002312 | GO:0000166|GO:0004812|GO:0005524|GO:0006418 | |
| Sto5g0774 | 551 | ProSiteProfiles | Aminoacyl-transfer RNA synthetases class-II family profile. | 246 | 543 | IPR006195 | - | |
| Sto5g0774 | 551 | SUPERFAMILY | Nucleic acid-binding proteins | 68 | 196 | IPR012340 | - | |
| Sto5g0774 | 551 | SUPERFAMILY | Class II aaRS and biotin synthetases | 221 | 548 | IPR045864 | - | |
| Sto5g0774 | 551 | Hamap | Aspartate--tRNA(Asp) ligase [aspS]. | 87 | 551 | IPR004523 | GO:0000166|GO:0004815|GO:0005524|GO:0005737|GO:0006422 | |
| Sto5g0774 | 551 | PANTHER | ASPARTATE--TRNA LIGASE, CYTOPLASMIC | 20 | 551 | - | - | |
| Sto5g0774 | 551 | CDD | AsxRS_core | 223 | 546 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sto5g0774 | K22503 | - | gmx:100811577 | 912.524 |
Event-related genes