Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0764 ATGAGTAGACCAGCTACACGgagtaaaaataaaagacaaagaCAAGTTGACGATGGTGCCGGCACCACTGAAATATGGAGGAAAATTCATGAAACTGGCGTGGTAACTGATGATGATATGAATCAACTGTATATGATTTGGAAGCCAATATGTTCAGGCTGCCGTGTTAATACTAAAGACAATCCTAATTGTTTTTGTGCATTGGTTCCACCTCCCAATGGAACCCGGAAGTCTGGCTTATGGCAGAAGATGTCTGGTATTCTTGACAATCTTGGACCCGACCCGACCAAGGATCTTCGGGCTTCTGCTACTTCTCCTGCTGGTCTGACAAATCTTGGGGCTACATGCTATGCCAACAGTATACTTCAGTGCTTGTACATGAATATACCTTTTCGCGAAGGCATATTTTCTGTAGAACCAGATGTTTTGCAACAACAGCCAGTGTTAAATCAACTGGCTCGACTCTTTGTGCAGTTGCACATTAGTAAGAAGTCTGTTGTAGATTCATTTCCTTTCGTAAAAACATTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCATGAGTTTCTGACATTGCTTCTGTCATTGCTTGAGCGTTGTCTGAGCCATTCTAAAGTTCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACCACTTGCTCACAATGTGGAAGAGACTCAGAAGCATCTTCTAAAATGGAAGACTTCTATGAGCTGGAGTTAAATGTCAAGGGCTTGAAAAGTTTAGATGAGAGCCTAGATGACTACCTCACTGTTGAAGAGCTTCATGGAGATAATCAATATTTTTGCGAGTGTTGTAAAACAAGAGTTGATGCTACCCGTAGCATCAAGCTGCGTACATTACCTGATGTGCTTAATTTTCAACTTAAACGTTGTGTCTTCCTTCCAGAGACTACAACAAGGAAGAAAATCACTTCTgcattttcatttccttctaCGCTTGACATGCGGCATAGATTGTCTGAGCCATCTCAGTCTAAATCAATTTATGACTTGTCTGCTGTACTAATTCACAAGGGAACCACTGTTAATAGTGGCCATTATGTGGCTCACATCAAGGATGAGAATACTGGGCAATGGTGGGAATTCGATGATGAACTTGTTACTAAATTAGGCTGTCATCCATTTGGTGACAAATCTTCAAATTCTACTACAAAAAATGCAAGGATTGCTGACAGTAATGGAAATGGTTTGGATGCCACTCACTCACAATCTTCTCTTGTGGAGACATTTTCATCTAGTGATGCATACATGTTGATGTACAATCTTAAGCATACTAAAAATGTAGGAAACACAGGGGGTGTGGTCAGTGGTGCTAACCACAAGGACAGGGAAGGTGATGTTGTTGCAAAAGACAGTTTTCCTCTTTTATCTCATCTTTTTGATGAGATTCAGAATTTTAATGCCTCGTATGCTGATGAGTGTGAGCAGTACACTCATAGGAAAGAGTTAGAATTGAGTTGTATCACTGAAAGGAGACAGGAAGTTCGATCAGTTTTAGTTGAAGCTCCTGTTCAACCACTTGAGCAACCATTTTATTGGATTTCTAGTGACTGGCTTCGTCAGTGGGCTGACAACATTAAGCCAACCACTCTTGACAACACCTCAATTCAATGCTCACATGGGAAAGTTCCAGTATCAAAGGTTACTTCAATGAAGCGATTGTCTGATAAGGCATGGAATAAGTTGTCATCTAAGTATGGCGGTGGTCCAGCTCTGTCCCATGGTGAGTGCTGTAGGGATTGTCTTATTGAAGGGGCTCACACTGTGGTGTCAGCTGACACATATAGGGACCGGAGAGAATCAATGAAGCAACTTGCTAGGGACATCCTTGATGGAAATTGTCCAGATGGAAAGTATTACATATCTAGACCATGGTTGCAACAGTGGTGGAAAAGAAAAGTACTCGATGCTCCATCTGAAGCAGATGCTGGACCAACGGCATCAATTAGTTGCCCACATGGGCAACTTATGCCTGAGCAAGCTGCTGGTGCTAAGCGGGTGCTTGTTCCTGAGAGCTTTTGGCTCTTCTTATATGAAGATGCTGTTTCTGTAAAACCTGATGATCCTTTTGGTTGCCCTACTTTTCCCGTAGACTCTAGACAGTGTTCCCAATGCAGTAATGAATTATCTGAAGTAGCATGCTTGGAAGACTCTTTAAGATTAGTGAAGCAAAGGCAACGTCAGAATCACGAGAAACTATTACTGGCAAAAAGTATGCCACTGTCTCTTAATTGCAAGTATTTCTTGGTGCCTTCTTCGTGGATTTCAAAATGGAAAAGTTACATGAGTCCATCTGTCAAGAATTCAGACAAACCTGAAACTTTGGATGGGATAATTAATTCCTTAATGTGTGAAAAGcACTCGCGGCTTGTTGAAAGACCCCCTGAACTGGTTTTCAGACGCGGCGCTATAATCCAGAGAGAATCTTCAGCAGGTGGCTTAACAATCATATCTGAGACTGACTGGAAATGCTTTTGTGAAGAATGGGGTGGTAATGAGACCAAAGGTATCTCTGCAGTGATTGAGAATATCTGTGATTCAGAGAATAATTTGACTGGATCCTGCCCGGAGACACCAATATGTGAGGATCAGTTGAGTGATAAAGTGAATAATGATAGTGAGACTGGGCAACTTGTGATTAAGACTTGTCCGGAGGTTTGTGAAAGTTGCATTGGAGAAAGAAAAAGCTGTGAGTTAATGCAGAAACTGAACTACTGCAATGAGAACATTTGTGTGATTCTTGTACGGGGAAAGGAAGTACCTAGATCAATATTAGAGGCTTCAAAGGGTTCTGTTGAAACAGATCGGCGTGTTTCCAAGCGCTCCCGGAAGTCTAAAAATGGGAGTTCAATTAGTCTTAAAGTTTCTGCTTCAACGTCATTGTACCAGCTAAAAATGATGATATGGGAATCCTTTGGGGTGGTCAAGGAAAACCAGATACTACAGAAAGGTGACAGGACAATTGATATTGACGATGAATGTGCTACGCTTGCTGATGTGAACATATTTGCAGGAGATCAGATTATTGTCAGGGACTCCGAGATACATGAAAATCGAGATATTGCCGATGAGATCTGTGACGAGAAAATGGAAGTGCAGCATACTGAAGGAGGATTTCGTGGAACACTGTTGACAGCAGACGTTACATCTCAGGTTGTTTGA 3207 0.4144 MSRPATRSKNKRQRQVDDGAGTTEIWRKIHETGVVTDDDMNQLYMIWKPICSGCRVNTKDNPNCFCALVPPPNGTRKSGLWQKMSGILDNLGPDPTKDLRASATSPAGLTNLGATCYANSILQCLYMNIPFREGIFSVEPDVLQQQPVLNQLARLFVQLHISKKSVVDSFPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLTVEELHGDNQYFCECCKTRVDATRSIKLRTLPDVLNFQLKRCVFLPETTTRKKITSAFSFPSTLDMRHRLSEPSQSKSIYDLSAVLIHKGTTVNSGHYVAHIKDENTGQWWEFDDELVTKLGCHPFGDKSSNSTTKNARIADSNGNGLDATHSQSSLVETFSSSDAYMLMYNLKHTKNVGNTGGVVSGANHKDREGDVVAKDSFPLLSHLFDEIQNFNASYADECEQYTHRKELELSCITERRQEVRSVLVEAPVQPLEQPFYWISSDWLRQWADNIKPTTLDNTSIQCSHGKVPVSKVTSMKRLSDKAWNKLSSKYGGGPALSHGECCRDCLIEGAHTVVSADTYRDRRESMKQLARDILDGNCPDGKYYISRPWLQQWWKRKVLDAPSEADAGPTASISCPHGQLMPEQAAGAKRVLVPESFWLFLYEDAVSVKPDDPFGCPTFPVDSRQCSQCSNELSEVACLEDSLRLVKQRQRQNHEKLLLAKSMPLSLNCKYFLVPSSWISKWKSYMSPSVKNSDKPETLDGIINSLMCEKHSRLVERPPELVFRRGAIIQRESSAGGLTIISETDWKCFCEEWGGNETKGISAVIENICDSENNLTGSCPETPICEDQLSDKVNNDSETGQLVIKTCPEVCESCIGERKSCELMQKLNYCNENICVILVRGKEVPRSILEASKGSVETDRRVSKRSRKSKNGSSISLKVSASTSLYQLKMMIWESFGVVKENQILQKGDRTIDIDDECATLADVNIFAGDQIIVRDSEIHENRDIADEICDEKMEVQHTEGGFRGTLLTADVTSQVV 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0764 1068 ProSiteProfiles DUSP domain profile. 608 710 IPR006615 GO:0004843
Sto5g0764 1068 SUPERFAMILY Ubiquitin-like 961 1027 IPR029071 -
Sto5g0764 1068 MobiDBLite consensus disorder prediction 1 20 - -
Sto5g0764 1068 Gene3D Cysteine proteinases 93 438 - -
Sto5g0764 1068 SUPERFAMILY DUSP-like 505 589 IPR035927 -
Sto5g0764 1068 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1038 - -
Sto5g0764 1068 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Sto5g0764 1068 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1038 - -
Sto5g0764 1068 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 438 IPR028889 -
Sto5g0764 1068 CDD Ubl_USP48 958 1059 IPR044743 GO:0004197|GO:0004843|GO:0016579
Sto5g0764 1068 Gene3D - 957 1028 - -
Sto5g0764 1068 ProSiteProfiles DUSP domain profile. 736 856 IPR006615 GO:0004843
Sto5g0764 1068 Gene3D - 732 855 IPR035927 -
Sto5g0764 1068 SMART dusp 519 595 IPR006615 GO:0004843
Sto5g0764 1068 Gene3D - 494 591 IPR035927 -
Sto5g0764 1068 MobiDBLite consensus disorder prediction 394 416 - -
Sto5g0764 1068 CDD Peptidase_C19L 108 435 IPR033841 GO:0004843
Sto5g0764 1068 Pfam Ubiquitin carboxyl-terminal hydrolase 108 435 IPR001394 GO:0004843|GO:0016579
Sto5g0764 1068 SUPERFAMILY Cysteine proteinases 105 439 IPR038765 -
Sto5g0764 1068 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Sto5g0764 1068 ProSiteProfiles DUSP domain profile. 501 593 IPR006615 GO:0004843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0764 Sto-Chr5 5199054 5206606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0764 105 379 Miscellaneous Gene Families AT4G31670 30.640 5.83e-28 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0764 - - gmx:100782778 1788.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0764 5 5199054 5206606 Sto5g0764 5 5199054 5206606 ECH