Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0750 ATGCCATCATCGAGAATGCTTCAGATTCACATTCTCTCGTACTTTCATCCGCTCCACTCTAAATCAAAGccactttcttctcttcttgtgcctccttcttcttcttcatcttcatcttctactCCGATACGGCGTCGTTTGAAGAGCACCGTCACTCCTGATAAAAGGAATCTTAAGCGCCTCACTTCCCGTATCGTCCAACTCACTCGTCGAAGGCAGCTTAGCCAGaTTTTTGAAGAGATTGAAATTGCCAAGAAACATTATGGGAAGCTCAACACTATTGTCATGAACGCGGTCATGGAAGCCTGTGTTCATTGCGGCGATATTGATTCAGCTCTTCGGATATTTGATGAGATGGCAAAACCGGAAAGTTGTGGTGTGGATAATGTCACGTATGCCACGCTTTTGAAGGGATTAGGCCAGTTGCAGAAAGTGGATGAAGCCTTTCAATTGCTTGAATATGTGGAAAAAGGTACTGCGCCTGGAAGTCCAAAGTTTTCAGCATCACTGATCTATGGTCTGCTAAATGCCATAATTGAAGCTGGTGAGTCAGACAGTGCAGGAGACTTACGTCGTGCAAATGGCCTCCTTGCTCGTTATGGTTATGTACTTCGTGAAGGTGGCAGTTTTCCCGTCTCAGTATACAACTTACTCATGAAGGGCTATATCAACGCAGGTATTCCTCAGGATGCAGTAAACTTGCACAAAGAAATGTTACGTCAAGGAATGATGCCTGACAGACTCACCTACAACACCCTTATATTAGCATGTGTCAAGAGTCAAAAGATGGATGCTgcattgaaatttttaaaagccATGAAGGGTGAAGCACAGAAATTTACTCATTATAATCTAATGCCAGATATTGTCACATATACAACACTGCTCAAGGGTTTTGGGGAGGCCAAAGATCTCTCTTCAGTTCTGAAAATAGTGCTGGAAATGAAATCATGTCATGATTTGTACATTGATCGAACAGCTTACACTGCAATAGTTGATGCTTTATTGAGCTGTGGCTCAATCAAGGGTGCTCAATGCATTTTTGGAGAAATACTGAAGCAGGCTGGTTGGAATCCAGAGTTGAGGCCAAAGCCTCACCTCTATCTTTCCATGATGCGTGCTTTTGCTTTTAAAGGAGATTACAATGTAGTCAGAAACTTACACAAGCGGATTTTGCCAGATTCTTCAGGAAGAATCTTGCCAGTAGTCCAAGAAGAAGCTGATCATCTTCTCATGGAAGCAGCACTGAATTGTGGTCAGGTTGATGTTGCCATCGAAACTCTTACTAGAATTGCTTCAAAATGGAGGAGTATATTGTGGACAAGTCGTGGAGGCATGgtAACTTTGCGCATTGAAGCCATATTGGGATTCTCAAAATCCATATTCAGTCCTTACTTACTTCCTCAGGTTTCACCTGCTGAACCAGTTGAGAGATTCATGTTGCCATTTGAAGCAGCCGGACCACTACGAGGTACTGTACAATTGAAGGAAGTGGTTATGCGTTTCTTTAATGAAGCAGTTGTTCCTATCGTAGATGATTGGGGAAGTTGTATAGGATTGTTGCACCGTGAAGACTGCACTCAGTTGAATGCTTCACTTTCAACAATGATGAGAGACCTGCCTCCCACCGTTACTACCACAACATCAGTTGGTCATGTAGTTGATTTGATGTTGGAGAAGAGGTACCCTATGGTTATTATTGTAAAGCACACCAGCTCTTACGGTACTACATATAGCTCAAGGGCAGTTGGTGTTTTTACGTCAGAACAATTGTATAGGCTTATCTCACCTGCTTCTGAATCACTAGGGCCAAAGCTTTCAATCTATAGAAGATTATAG 1839 0.4105 MPSSRMLQIHILSYFHPLHSKSKPLSSLLVPPSSSSSSSSTPIRRRLKSTVTPDKRNLKRLTSRIVQLTRRRQLSQIFEEIEIAKKHYGKLNTIVMNAVMEACVHCGDIDSALRIFDEMAKPESCGVDNVTYATLLKGLGQLQKVDEAFQLLEYVEKGTAPGSPKFSASLIYGLLNAIIEAGESDSAGDLRRANGLLARYGYVLREGGSFPVSVYNLLMKGYINAGIPQDAVNLHKEMLRQGMMPDRLTYNTLILACVKSQKMDAALKFLKAMKGEAQKFTHYNLMPDIVTYTTLLKGFGEAKDLSSVLKIVLEMKSCHDLYIDRTAYTAIVDALLSCGSIKGAQCIFGEILKQAGWNPELRPKPHLYLSMMRAFAFKGDYNVVRNLHKRILPDSSGRILPVVQEEADHLLMEAALNCGQVDVAIETLTRIASKWRSILWTSRGGMVTLRIEAILGFSKSIFSPYLLPQVSPAEPVERFMLPFEAAGPLRGTVQLKEVVMRFFNEAVVPIVDDWGSCIGLLHREDCTQLNASLSTMMRDLPPTVTTTTSVGHVVDLMLEKRYPMVIIVKHTSSYGTTYSSRAVGVFTSEQLYRLISPASESLGPKLSIYRRL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0750 612 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 318 IPR002885 -
Sto5g0750 612 Gene3D - 490 596 IPR046342 -
Sto5g0750 612 Gene3D Tetratricopeptide repeat domain 3 158 IPR011990 GO:0005515
Sto5g0750 612 Gene3D Tetratricopeptide repeat domain 173 279 IPR011990 GO:0005515
Sto5g0750 612 Pfam Pentatricopeptide repeat domain 282 317 IPR002885 -
Sto5g0750 612 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 92 122 IPR002885 -
Sto5g0750 612 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 246 280 IPR002885 -
Sto5g0750 612 Gene3D Tetratricopeptide repeat domain 282 449 IPR011990 GO:0005515
Sto5g0750 612 PANTHER OS09G0431600 PROTEIN 26 601 IPR044781 -
Sto5g0750 612 Pfam PPR repeat family 212 259 IPR002885 -
Sto5g0750 612 Pfam PPR repeat family 92 139 IPR002885 -
Sto5g0750 612 TIGRFAM PPR: pentatricopeptide repeat domain 214 246 IPR002885 -
Sto5g0750 612 TIGRFAM PPR: pentatricopeptide repeat domain 290 318 IPR002885 -
Sto5g0750 612 TIGRFAM PPR: pentatricopeptide repeat domain 96 119 IPR002885 -
Sto5g0750 612 TIGRFAM PPR: pentatricopeptide repeat domain 249 274 IPR002885 -
Sto5g0750 612 MobiDBLite consensus disorder prediction 26 51 - -
Sto5g0750 612 SUPERFAMILY CBS-domain pair 499 594 IPR046342 -
Sto5g0750 612 MobiDBLite consensus disorder prediction 26 47 - -
Sto5g0750 612 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 211 245 IPR002885 -
Sto5g0750 612 ProSiteProfiles CBS domain profile. 536 602 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0750 Sto-Chr5 5072192 5077039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0750 106 387 Glycosyltransferase AT1G05670 25.000 4.23e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0750 - - gmx:100813146 813.913