Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0735 ATGGCAATGGTGGATGTTGAACCCAACTATATAGATAGCTATAATGTTATGAAGATCCTTGCAGCTGAAGGCGTAGAGTTTCTTCTATCTAATGAAGGACAGGTTCCCTTGTCATCATGCAATGGGAAGACAATCTGCCTTTTCTTCTCTGCAAACTGGTGTAGGCCATGCAGAACATTCATTCCTCATCTGATTGAACTTTATCACACTTTGACAAAGAAGGGTGTAAGCCTAGAGatcatcttcatctcctttgaccatgatgaagatggatttcaACAACAGTTCAAGAGCATGCCATGGCTGGCCGTCCCATTTGATGTCAATTTGCATAGAAGATTTATTGACAGGTTCCGGGTTGATCGAATCCCATCATTCATTCCACTATGTTCTGATGGCATCACTGTGGAAGAAGACTGGATAGGGTGCATAGAGGATTATGGTGCTGAGGCATTTCCTTTCACAAAAGAAAGACGAGAGGAGTTGAAAGCCATAGATAAGAGAAAGCGTGAGGAAGCAAGCTTGGAAGAATTATTGACACATGAAGGGCGCAACTTTCTCATCTCTAGGGATGATGGAAAGGTACTGGTATCTGAACTTGTGGGCAAAACAGTAGGCCTCTATTTTTGTGCATACTGGTCTCCTCCTTGCCGTGCCTTCACTGTGCAACTCACAGAAGCATACAACAATCTTAAGACTGGAAAAGACCAAGACTGCTTTGAGATTGTTTTGATCTCAACAGATAGAGACATGAAGGAATTCAATGTGAATATAAGTAGCATGCCATGGCTTGCCATACCATATGAGGACAGAACAAGGCATGAACTATGTAGAATCTTTGATATCAAAGGGATTCCAGCACTAGTCCTGATTGGACCAGATGGTAAAGTGATGAGTGTGAATGGGAAGGTTATGGTGTCCTCATATGGTGCTGAAGCATTCCCATTTACAGAGTCAAGGATAAGGGACATAGAAGCAGCTGTGAGAAAGGAAGGAGAAGGTTTGGCTCAGGAGGTTGAGGATGTGAAGCATGAACATTTGCTCAAGTTGGATATGGCCAAAGCATATGTTTGTGATTTCTGTGAAGAGCAAGGGAGGTTCTGGGCATTTTCTTGTGATGTCTGTGACTATGACCTCCATCCTAGTTGTGTAGAGAAAAAGCTCAACAAAGATGAAAACTTCTAA 1185 0.4118 MAMVDVEPNYIDSYNVMKILAAEGVEFLLSNEGQVPLSSCNGKTICLFFSANWCRPCRTFIPHLIELYHTLTKKGVSLEIIFISFDHDEDGFQQQFKSMPWLAVPFDVNLHRRFIDRFRVDRIPSFIPLCSDGITVEEDWIGCIEDYGAEAFPFTKERREELKAIDKRKREEASLEELLTHEGRNFLISRDDGKVLVSELVGKTVGLYFCAYWSPPCRAFTVQLTEAYNNLKTGKDQDCFEIVLISTDRDMKEFNVNISSMPWLAIPYEDRTRHELCRIFDIKGIPALVLIGPDGKVMSVNGKVMVSSYGAEAFPFTESRIRDIEAAVRKEGEGLAQEVEDVKHEHLLKLDMAKAYVCDFCEEQGRFWAFSCDVCDYDLHPSCVEKKLNKDENF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0735 394 SUPERFAMILY Thioredoxin-like 188 299 IPR036249 -
Sto5g0735 394 Gene3D Glutaredoxin 19 158 - -
Sto5g0735 394 ProSiteProfiles Thioredoxin domain profile. 177 326 IPR013766 -
Sto5g0735 394 CDD TryX_like_TryX_NRX 185 316 IPR045870 GO:0004791
Sto5g0735 394 Gene3D Glutaredoxin 178 318 - -
Sto5g0735 394 ProSiteProfiles Thioredoxin domain profile. 16 170 IPR013766 -
Sto5g0735 394 SUPERFAMILY Thioredoxin-like 26 139 IPR036249 -
Sto5g0735 394 Pfam C1 domain 343 384 IPR004146 -
Sto5g0735 394 PANTHER THIOREDOXIN 3 386 - -
Sto5g0735 394 PANTHER NUCLEOREDOXIN 3-RELATED 3 386 - -
Sto5g0735 394 Pfam Thioredoxin-like 202 297 IPR012336 -
Sto5g0735 394 Pfam Thioredoxin-like 42 129 IPR012336 -
Sto5g0735 394 SUPERFAMILY Cysteine-rich domain 341 385 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0735 Sto-Chr5 4957794 4959709 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0735 K17609 - gmx:100778160 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0735 5 4957794 4959709 Sto5g0735 5 4957794 4959709 ECH