Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0726 ATGGAAGTGCGATCTTCTTCTTCCTACTCgtcttcttctctcactctgGGATTAAGCATGGATCAAAACCTAGATTTTAACGCCCCTCATTCCATGGGAACGACCATCATCGGTGTTACATACAACGGTGGTGTTGTTCTCGGAGCCGACTCCCGAACCAGCACTGGAGTATATGTTGCAAACAGGGCATCTGATAAAATTACCCAGCTGACTGATAATGTCTATGTGTGCCGTTCTGGATCGGCTGCAGATTCGCAGATAGTGTCTGATTATGTCCGCTACTTCCTTCACCAACACACGATACAGCTTGGTCAACCTGCTACTGTCAAAGTGGCTGCGAACCTTGTCCGCCTTCTTTCCTATAACAACAAGAATTTCTTAGAGACTGGCCTAATTATTGGTGGATGGGACAAATACGAAGGGGGACAAATTTATGGAGTTCCTCTGGGTGGCACAATAGTACAACAACCTTTTGCTATTGGAGGATCTGGCTCCAGTTACTTGTATGGATTTTTTGACCAAGCGTGGAAAGAAGGAATGACCAAAGATGAAGCAGAGGAATTAGTTAAAAAAGCTGTTTCTCTGGCTATTGCTCGTGATGGTGCAAGTGGTGGTGTTGTACGTACTGTCATTATAAATTCAGAGGGAGTGACTAGGAACTTTTACCCAGGGGACAAACTTCCACTATGGCACGAGGAGCTGGAGGCACAGAATTCATTGTTGGATATTCTAAGTGCCCCAAGTCCTGAGCCCATGAACATATAG 765 0.4418 MEVRSSSSYSSSSLTLGLSMDQNLDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIIGGWDKYEGGQIYGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEELVKKAVSLAIARDGASGGVVRTVIINSEGVTRNFYPGDKLPLWHEELEAQNSLLDILSAPSPEPMNI 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0726 254 PRINTS Proteasome component signature 41 56 IPR000243 GO:0004298|GO:0005839|GO:0051603
Sto5g0726 254 PRINTS Proteasome component signature 162 173 IPR000243 GO:0004298|GO:0005839|GO:0051603
Sto5g0726 254 PRINTS Proteasome component signature 173 184 IPR000243 GO:0004298|GO:0005839|GO:0051603
Sto5g0726 254 PRINTS Proteasome component signature 198 209 IPR000243 GO:0004298|GO:0005839|GO:0051603
Sto5g0726 254 ProSitePatterns Proteasome beta-type subunits signature. 37 84 IPR016050 GO:0005839|GO:0051603
Sto5g0726 254 PANTHER PROTEASOME SUBUNIT BETA 26 252 - -
Sto5g0726 254 Pfam Proteasome subunit 32 212 IPR001353 GO:0005839|GO:0051603
Sto5g0726 254 ProSiteProfiles Proteasome beta-type subunit profile. 33 212 IPR023333 -
Sto5g0726 254 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 26 252 - -
Sto5g0726 254 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 20 219 IPR029055 -
Sto5g0726 254 CDD proteasome_beta_type_6 34 221 - -
Sto5g0726 254 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 34 233 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0726 Sto-Chr5 4928601 4933607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0726 K02738 - gmx:100793551 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0726 5 4928601 4933607 Sto5g0726 5 4928601 4933607 ECH