Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0703 ATGGCGTTAAGTTGTAGGGTTCTATTATCATCAGTGAGAAAGATGTGCAATGGAACGCTTCACTTTCTATCATTTCCTTCAGGCTCTCACCATTTGAATttccaaactgaatcaaattcAAATCCCTTGCTCCTTAAATTGATTCGTGTATCCAATTCACGCATCAAGTCCACGTTGGATCAGGAATTTAATTCTCTTAAAAGCTCCGAATTTTCTTGGGAATCTCTGGTTACCTCTCTCAGGCCTTCTTCTTCTGAGAAAGCTCGGCTGGTTTTGGAATGGGTTCTGGAGAAAATCCTGAAAGATAATGAAAAAAACCGTAGTGTCTTCTCTGAATTCATCCTTCTTTGTGGCAAGCTTCAGATTGTACCACTAGCAATTCAAGCGTTTGCTTCAATGGAAGCTAATGGAGTTAAACCCACCTCCGTGGTTTTAAATTCCCTTATAAATGCTTGCTTGTGTTCACATGATATTGTTACAGCATTAAGCTTATTTGAGATCATGGAGATTTCAGAGAGCTATAAACCTGATTTTCAAACTTATAATATCTTCATTTCAGCATTTTCTAAGTCAGGGAATGTTGATGCCATGTTAGCTTGGTACTCATCTAAAAAGTCTGCTGGACATGGTCCTGATCTTCAAACATTTGAATCCCTTATATCAGGTTGTGTCAAAtcaagaaattttgaaattgctGATAGAATTTATGAAGAAATGACGACGTCGGGAATTGTACCTAGTATATCCATACTGGAAAATATGCTTGAAGGATTCTGCAAACAAAAAAATCTGGGTCGAGCAGAGGAATTCTTTAAGTTTGTGGTAGGTGCCAGATGGGAGATCAATGAAAACATGGTTCAGAAGTTGATGGGATTGTATGTAGAATTAGGGCAAGTGGAAAAAATGGAGGATCTACTTGAAACTATGACAAAGTCGCATCATATTACTAATGAAGTTCTCTCACAAATTCACTGTGGGATTATACGGATGTATGCCAAACTGGATAGATTGGATGAtgtagagtttgctgtgggaaGAATGTTGAAACAAGGGCGATCATTCACAAGTACAGATGATGTTGAAAAGGTTATCTGCTCCTACTTTAGAAGAGAAGCTTATGATAGGTTAGATATATTCTTGGAATGTATAAAGAGTTGCCATACACTTAGTAGATCCACTTACGATTTGTTGATATCTGGCTATCGAAGAGCTGGATTACATGAAAAAGTAGATTCAATAATGGAAGCCACGAAATCACTTGGATTTGCCTAG 1272 0.3608 MALSCRVLLSSVRKMCNGTLHFLSFPSGSHHLNFQTESNSNPLLLKLIRVSNSRIKSTLDQEFNSLKSSEFSWESLVTSLRPSSSEKARLVLEWVLEKILKDNEKNRSVFSEFILLCGKLQIVPLAIQAFASMEANGVKPTSVVLNSLINACLCSHDIVTALSLFEIMEISESYKPDFQTYNIFISAFSKSGNVDAMLAWYSSKKSAGHGPDLQTFESLISGCVKSRNFEIADRIYEEMTTSGIVPSISILENMLEGFCKQKNLGRAEEFFKFVVGARWEINENMVQKLMGLYVELGQVEKMEDLLETMTKSHHITNEVLSQIHCGIIRMYAKLDRLDDVEFAVGRMLKQGRSFTSTDDVEKVICSYFRREAYDRLDIFLECIKSCHTLSRSTYDLLISGYRRAGLHEKVDSIMEATKSLGFA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0703 423 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 212 246 IPR002885 -
Sto5g0703 423 Gene3D Tetratricopeptide repeat domain 283 423 IPR011990 GO:0005515
Sto5g0703 423 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 422 - -
Sto5g0703 423 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 177 211 IPR002885 -
Sto5g0703 423 Gene3D Tetratricopeptide repeat domain 80 230 IPR011990 GO:0005515
Sto5g0703 423 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 422 - -
Sto5g0703 423 TIGRFAM PPR: pentatricopeptide repeat domain 180 212 IPR002885 -
Sto5g0703 423 TIGRFAM PPR: pentatricopeptide repeat domain 215 247 IPR002885 -
Sto5g0703 423 Pfam Pentacotripeptide-repeat region of PRORP 199 312 IPR033443 -
Sto5g0703 423 Pfam PPR repeat 392 421 IPR002885 -
Sto5g0703 423 Pfam Pentatricopeptide repeat domain 132 189 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0703 126 311 Glycosyltransferase AT1G05670 22.222 1.37e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0703 - - gmx:100778561 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0703 5 4770927 4772790 Sto5g0703 5 4770927 4772790 ECH