Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0700 ATGGCCTCCTTCTCTCACCCTCCTGCCTTCAAAACATCCCTCATATTGCCTCGTCTTTGTGGTTTCCTAACCTCCCCTCAACCTCTTAGAGCTGTACATTTGTATCCCCAGTCCGCGGTTCAATCTCACACTCTATGCAAGATGAATGGATCAGATATGATATCGCAGCTGGAACTTGGAAAATCTAAGGAAAAGAGGAAACCGGAGAAACGAGTGAGTGGGATATTCTGGATCATACTCCTCAACATTGGAATATATGTGGCAGATCATTTCTTTCAGGTTAGTAGTATCAAAGCTCTGTATTTGTACCACAACTGGCCTGCTTGGTATCAGTTTCTCACAGCAACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGTAATCTTTTCTTCTTGTACATTTTTGGAAAGCTTgttgaagaagaggaagggaacTTTGCTTTGTGGCTTTGTTACATTTTCACTGGTGTTGGAGCTAACCTTGTTTCATGGTTGGTTCTACCGAGAAATGCAGTCTCTGTTGGAGCTTCTGGTGCAGTTTTTGGGTTGTTTACAATCAGCGTCCTTGTAAAGATTTCTTGGGATTGGAGGAAGATTCTTGAAGTGCTTATATTGGGGCAGTTTGTAATAGAGAAGGTTATGGAAGCAGCCCAAGCTTCTACAGCACTATCAGGCACCTTTCGCGGAGGCTACTTAATTCAGAGTGTCAATCACATTGCACATCTTTCTGGTGCTCTAGTTGGCGTGCTTTTGGTCTGGCTTCTTAGCAAAGTCCCCTCTGAACCTTCTGATCCAGCATCCACTTTGAACAAGAAAACGGGCAGAACTCAATACTGTTTCTGGCACATGATGGAAAATCCTTCACCAGATCTACAAGTTTGTGAGAGGCACTTGAATTTTGTTGAGAGCAATGAGCTTTCCAGATCAGCATCCCTCAAGAACATTCTTCTTCTCCTAGCTGCCACAGCTGAGACTCTTTGA 981 0.423 MASFSHPPAFKTSLILPRLCGFLTSPQPLRAVHLYPQSAVQSHTLCKMNGSDMISQLELGKSKEKRKPEKRVSGIFWIILLNIGIYVADHFFQVSSIKALYLYHNWPAWYQFLTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLCYIFTGVGANLVSWLVLPRNAVSVGASGAVFGLFTISVLVKISWDWRKILEVLILGQFVIEKVMEAAQASTALSGTFRGGYLIQSVNHIAHLSGALVGVLLVWLLSKVPSEPSDPASTLNKKTGRTQYCFWHMMENPSPDLQVCERHLNFVESNELSRSASLKNILLLLAATAETL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0700 326 Pfam Rhomboid family 109 257 IPR022764 GO:0004252|GO:0016021
Sto5g0700 326 PANTHER RHOMBOID-RELATED PROTEIN 43 273 - -
Sto5g0700 326 Gene3D - 69 261 IPR035952 -
Sto5g0700 326 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 43 273 - -
Sto5g0700 326 SUPERFAMILY Rhomboid-like 75 259 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0700 Sto-Chr5 4758834 4761747 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0700 - - jre:109009521 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0700 5 4758834 4761747 Sto5g0700 5 4758834 4761747 ECH