Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0686 ATGGCATCTATTAGAAGAACCTTGTCTCCAGTGCCTCGAGCTGGCACCATAGCAAATGGCGAAGTCTGTTTAGTAGGTTCTCCCTTGTCTAAATCCTCATCAAGTCCTCAAAATTGTCCACCATCCACTGGATTGTTACCTCATTCAGTCAGCTCGTTGGACTCTCGCGCTTTGGTTCTTGGTGTATTTTCACCTAGATTTTTGAGGGCCTCTGAGAGATCAAAGATAAAGGGCCAACTTTGGAGGAAGGTGCTCTTCCATTTCTTTATTTGCTTCATGGTTGGGGTTTCCATTGGACTTATCCCTCTTGCTTCAATGAATCTGTCCCTGAATCTAATGCCAAAGCATCAAGCCTTCTCTTTTGAGGTTATATCTTCTGTTGGAAATTTTCAGTCATATGAAAATGTGAAGATAAATGTGACACCATCAACCAATGAGACCGTGAAGTTTAATGCTACATTGGATTCAACATTGAAGGAACAGGACATAATAGATGGGATAGCAGATAATATATCTAGTAGTCAATCAATCGGTGAAAAGCCATATTTGGAGTCTAAGAAACTTCTTATAATTGTGACCACTACGCACAATCAGCCATTTCAAGCTTATTACTTGAGTCGCTTGGCTTACACACTAAAACTGGTCCCACCTCCTTTGTTGTGGATTGTTGTTGAGATGACTTCCCAATCTGAAGAAACTGCCGAAATATTGAGGAGTAGTGGGGTTATGTACAGGCATCTCATTTGCAAAGCAAATCTAACCAACACAAGTGATAGGAGGATTTTTCAAAGAAATGTTGCACTAGCTCACATTGAAACTCACCGACTTGATGGAATTGTTTACTTTGCAGATGATGATAACATCTACTCAGCTGAGCTCTTTCGGCAAATGAGAGAAATAAGGCGATTTGGAACATGGACTGTGGCTAAACTTTCAGGGGATAAATATAATATGGTACTGCAAGGACCCGTTTGTAATGGAAGTCGAGTACTCGGATGGCACGCAAATGAATCAAAAAGGAGTTCTCAAAGATTTCATGCTGAGATGTCTGGTTTTGCATTCAATAGTACCATACTGTGGGATCCAAAGAAATGGCACCGACCCACTCTTGAACCTATTAGGCAGCTTGACAAAGTCAAGGAAGATTATCAGGTTAGCACGTTCATTGAGCAGGTTGTTGAGGATGAAAGCCAAATGGAAGGCTTAATGAACAACTGCTCCAGAATTATGGTTTGGCATATTGATATGTTACCCAATTTGGATCTCATCCTTCTTGCCCTTCTCCACGCCTCACTCATAGCTTGTGTGCTTCTCATGGTGATCTTCATCATCTTGCTGGGTCTCCTTGTGGCTTTCTCCTTCGGACTCCTGCTGGTTTTCGTATTTGAAGTGCAGGGTTTTTCTCTAGCTCTTTCTGAGTATTTAGAAATGGCGAAGGATGATTTGAAATTGGGTATGGTTCTAGTTTTTGTTTTCCTATTGCATCAAGCTGTTAGCTTTGTGTTGGATTCAAAACCCAAGGGCAAGGCCTTAGAATTCAAAGGGAAAGGCATGACATTAATTGTGTAG 1569 0.413 MASIRRTLSPVPRAGTIANGEVCLVGSPLSKSSSSPQNCPPSTGLLPHSVSSLDSRALVLGVFSPRFLRASERSKIKGQLWRKVLFHFFICFMVGVSIGLIPLASMNLSLNLMPKHQAFSFEVISSVGNFQSYENVKINVTPSTNETVKFNATLDSTLKEQDIIDGIADNISSSQSIGEKPYLESKKLLIIVTTTHNQPFQAYYLSRLAYTLKLVPPPLLWIVVEMTSQSEETAEILRSSGVMYRHLICKANLTNTSDRRIFQRNVALAHIETHRLDGIVYFADDDNIYSAELFRQMREIRRFGTWTVAKLSGDKYNMVLQGPVCNGSRVLGWHANESKRSSQRFHAEMSGFAFNSTILWDPKKWHRPTLEPIRQLDKVKEDYQVSTFIEQVVEDESQMEGLMNNCSRIMVWHIDMLPNLDLILLALLHASLIACVLLMVIFIILLGLLVAFSFGLLLVFVFEVQGFSLALSEYLEMAKDDLKLGMVLVFVFLLHQAVSFVLDSKPKGKALEFKGKGMTLIV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0686 522 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 416 IPR005027 GO:0015018|GO:0016020
Sto5g0686 522 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 188 421 IPR029044 -
Sto5g0686 522 SUPERFAMILY Nucleotide-diphospho-sugar transferases 188 417 IPR029044 -
Sto5g0686 522 CDD GlcAT-I 187 413 IPR005027 GO:0015018|GO:0016020
Sto5g0686 522 Pfam Glycosyltransferase family 43 208 416 IPR005027 GO:0015018|GO:0016020
Sto5g0686 522 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 1 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0686 Sto-Chr5 4641688 4645818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0686 1 416 Glycosyltransferase AT1G27600 45.107 2.04e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0686 K20869 - gmx:100808765 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0686 5 4641688 4645818 Sto5g0686 5 4641688 4645818 ECH