Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0682 ATGTTGTTGTTTTGGGTGTCAGTGAGCTCAAGCAACTCTAAGTGCTCAGTTAATCATGGGCTGGAGAAGATAGACGAGAATGGTCCTGCAGACTGGACAGCAGTGTCTTGTGCCCCTCCTGAAACTCCAACTGAATCAATGGAGTTTCTTGCTAGATCATGGAGTCTCTCTGCCATGGAGCTCTCCAAGGCACTCCACAACACCAATATTTCCACTTCTGATTGTGTCCAGATGCCTCTTTCCTGTTCTCTTGTTACTGAGGTTGCTACTAAGCCTACAAAAGAATCTTTACCTAATGGGTGTAGCCCTCCAATTTCGCCAAGAGGCAGTGAAGAGATGAAGGAGTTGTTTCTACTTCATCAAGCACTCAATCCAGAATTCCTTTCAGGTCAACATTTGCTCAGAAATGGGATTTACAGGAGCTTGCTAAGAGGGAAGACAATGGGTAGGTGGACGAAAGATCAAAAGGAGAGGAAAAAGCAGGAAATAAGGACTCATAATGCTCAATTGCATGCTGCAGTATCTGTGGCAGGTGTTGCTGCTGCTGTTGCTGCAGCAGCAGCTTCAACAGCATCCCCTGATATGCCATTTTCCAACCATAAGAACCCTCCCAAGATTTCAACTGCAATTGCATCTGCAGCAGCATTAGTTGCTTCTCATTGCATTGAGATTGCAGAAGACATGGGAGCTGATCATGACCAAATCTTAACAGCAGTTAACTCTGCCATTAATGCCAAGACTAATGGAGATATAATGACTCTAACAGCTGGTGCAGCTACAGCCTTGAGAGGCGCTGCTACTCTAAAAGCAAGGCTGCAAAAGGGTATTGGAGGCACAACATTTCCTTTAATGGAGGAAAAGTGTGAAGAAGGCAAAGAAGCAAACAACATCTTGACAGCACTAGACTGTGTCTTCAGAGGAGGAGAACTTCTCAAACGTACTAGAAAAGGGGATCTTCACTGGAAGCAAGTGTCCTTCATTATGAATTCAAATTTACAGGTTGTAGCCAAATTGAAAAGCAAGCATATGGCAGGAACattcaagaaaaagaagaaatATACAGTGACTGGAGTGTGCAGTGATATCACAGCTTGGCCGGGAAGGGAGAAGCAAGACGGGGAAAAGAGGGCATATTTCGGAATAAAAACAGCAGAGAGGATAATAGAATTTGAATGTGCAAGTAAAGATGAGAAAAGGGTATGGATTGAGGGGATCCAGTATATGTTGAATTGCCGTGCCAAAGTAACATAA 1251 0.4349 MLLFWVSVSSSNSKCSVNHGLEKIDENGPADWTAVSCAPPETPTESMEFLARSWSLSAMELSKALHNTNISTSDCVQMPLSCSLVTEVATKPTKESLPNGCSPPISPRGSEEMKELFLLHQALNPEFLSGQHLLRNGIYRSLLRGKTMGRWTKDQKERKKQEIRTHNAQLHAAVSVAGVAAAVAAAAASTASPDMPFSNHKNPPKISTAIASAAALVASHCIEIAEDMGADHDQILTAVNSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGIGGTTFPLMEEKCEEGKEANNILTALDCVFRGGELLKRTRKGDLHWKQVSFIMNSNLQVVAKLKSKHMAGTFKKKKKYTVTGVCSDITAWPGREKQDGEKRAYFGIKTAERIIEFECASKDEKRVWIEGIQYMLNCRAKVT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0682 416 CDD PH 308 405 - -
Sto5g0682 416 Pfam Auxin canalisation 40 279 IPR008546 -
Sto5g0682 416 Pfam Plant pleckstrin homology-like region 309 412 IPR013666 -
Sto5g0682 416 Gene3D - 284 415 IPR011993 -
Sto5g0682 416 ProSiteProfiles PH domain profile. 303 410 IPR001849 -
Sto5g0682 416 PANTHER EXPRESSED PROTEIN 15 415 IPR040269 -
Sto5g0682 416 SUPERFAMILY PH domain-like 290 408 - -
Sto5g0682 416 SMART PH_update 304 412 IPR001849 -
Sto5g0682 416 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 15 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0682 Sto-Chr5 4618457 4620913 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0682 - - gmx:100814154 574.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0682 5 4618457 4620913 Sto5g0682 5 4618457 4620913 ECH