Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0674 ATGAGACCGCTGAATGGAGAGGAAGCACAGATTACAAACAACCAAATTGAGGATTTCACCTGCAATTTTGAAATTCTTAAAGCCACAATGATCAGACAGAGCAACGGAGAAATGGTCTTGCCTGGGCTTAATGTTTGGTTTGGCAATGGCAGATTTGATGAGAGAAAATGCTGGTCGCGAGAGAGAGACGTCTGTGACTGCGTGCCTCTGGACGACGTCTGCCTCCGGCGGAGGAATCTCCGGCCATGTGAGCTGCACCGCCTCCTCAACACCCCCAGCTTGCCGGAAGCAATAGCAGGGGCCAGGCTCCGGCAGAGGTTCCAGCAGGTGGTGTCCAATGAGGGAGGGGGTTTGATTGGGAGTATGGAGATAGAAGAGGGAAGAAGATGCCCGGTGTGTTTGGAGGAGATGGGGAAGGATAAGGAAGAGAGGGTGGTGGCATGTGGGAGATGCGAGAATCCTATTCATGAAGAGTGCTTGGTTAGGTGGAAGAGAAGCAGGGGAAAGAGATGGGCGAGGTGTGTGATATGTAGGGCCAAGTGGAAGGATAGGAGAGAGCAGGATAAGTATCTCAATCTCTCTGCTTATGTTATTCAGGATAAGGACCACACTGTCCAGCCTAGTGCTAGTGGCAGCGAGCTAGTCTCTGCACTCTCTAATTAA 663 0.5128 MRPLNGEEAQITNNQIEDFTCNFEILKATMIRQSNGEMVLPGLNVWFGNGRFDERKCWSRERDVCDCVPLDDVCLRRRNLRPCELHRLLNTPSLPEAIAGARLRQRFQQVVSNEGGGLIGSMEIEEGRRCPVCLEEMGKDKEERVVACGRCENPIHEECLVRWKRSRGKRWARCVICRAKWKDRREQDKYLNLSAYVIQDKDHTVQPSASGSELVSALSN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0674 220 ProSiteProfiles Zinc finger RING-type profile. 130 178 IPR001841 -
Sto5g0674 220 ProSiteProfiles Zinc finger RING-CH-type profile. 122 184 IPR011016 GO:0008270
Sto5g0674 220 SUPERFAMILY RING/U-box 122 185 - -
Sto5g0674 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 198 IPR013083 -
Sto5g0674 220 PANTHER - 68 204 - -
Sto5g0674 220 Pfam Ring finger domain 129 178 IPR001841 -
Sto5g0674 220 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 68 204 IPR039903 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0674 Sto-Chr5 4561369 4566694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0674 - - adu:107470742 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0674 5 4561369 4566694 Sto5g0674 5 4561369 4566694 ECH