Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0658 ATGGAGAGAGAGGAGGAACTACTTCTAAAGAATCTTGGTTGGAAAGGAAAAGGACTAATAAGGAGTGCATGTGATGCTGAAACAAATTCAAGTTCTCATCAAGACAGTTCAGATGATGAATTGTCAAAAGACAGGAAGAAAGAAGGCAGTCTCAGATTTTATAAGCCAAAGTTCAGCTATATCTTCTGCGATATGGATGGAACATTGCTGAACAGCAAAAGTCAAATTACTCCAACAACTGCCGAGGCTTTAAGAGAGGCATTGTCGAGGGGTGTGAAAATTGTGATAGCTACTGGAAAAGCTCGTCCAGCTGTAATAGATATTCTTAAGATGGTGGACTTAGCTGGAAAAGATGGCATTGTTTCAGAAGTTTCCCCTGGTGTTTTCTTACAGGGATTGCTTGTTTATGGCAGACAAGGTCGGCAAATTTTCAAGAGCAACTTAGATCCTAATATCAGTAGAGAGGCTTGCTTATACTCTTTGGAAAATAAGGTTCCACTTATTGCATTCAGCGAGGGCCGCTGCTTAACCCTTTTTGATCACCCACTGGTTCATTCGCTGCATACAGTATATCATGAACCTAAGGCAGAGATCATGCCTTCTACAGAACATCTCCTTGCTGCTGCTGACATACAGAAAATGCTTTTCTTGGACACTGCAGAGAGAGTGGCTAGCACATTGCGGCCATACTGGTCAGAGGCAACAAAGAGTCGTGCTACTGTTGTTCAAGCTGTGCCAGACATGCTTGAAATTGTACCCTTGGGAACTTCAAAGGGAAATGGAGTAAAAATGCTTCTAGATCATTTGGGGGTTACTGCTAAAGAGATCATGGCTATTGGTGATGGGGAGAATGATATTGAGATGCTTGAGCTGGCTTCTCTAGGCATTGCTCTTAGTAATGGACAAGAGAAGACAAAAGCTGTGGCTGATGTAATTGGTATCAGCAATGACGAAGATGGTGTAGCTGATGCCATCTACCGTTATGCATTCTGA 993 0.425 MEREEELLLKNLGWKGKGLIRSACDAETNSSSHQDSSDDELSKDRKKEGSLRFYKPKFSYIFCDMDGTLLNSKSQITPTTAEALREALSRGVKIVIATGKARPAVIDILKMVDLAGKDGIVSEVSPGVFLQGLLVYGRQGRQIFKSNLDPNISREACLYSLENKVPLIAFSEGRCLTLFDHPLVHSLHTVYHEPKAEIMPSTEHLLAAADIQKMLFLDTAERVASTLRPYWSEATKSRATVVQAVPDMLEIVPLGTSKGNGVKMLLDHLGVTAKEIMAIGDGENDIEMLELASLGIALSNGQEKTKAVADVIGISNDEDGVADAIYRYAF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0658 330 Pfam haloacid dehalogenase-like hydrolase 61 325 - -
Sto5g0658 330 SFLD C2.B: Phosphomannomutase and Phosphatase Like 61 329 - -
Sto5g0658 330 TIGRFAM Cof-subfamily: Cof-like hydrolase 60 325 IPR000150 GO:0016787
Sto5g0658 330 SFLD Haloacid Dehalogenase 61 329 - -
Sto5g0658 330 ProSitePatterns Hypothetical cof family signature 2. 279 301 - -
Sto5g0658 330 CDD HAD_Pase 61 327 - -
Sto5g0658 330 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 1 330 IPR002036 GO:0004222|GO:0006364
Sto5g0658 330 Gene3D - 147 254 - -
Sto5g0658 330 Gene3D - 61 325 IPR023214 -
Sto5g0658 330 SUPERFAMILY HAD-like 54 328 IPR036412 -
Sto5g0658 330 MobiDBLite consensus disorder prediction 25 45 - -
Sto5g0658 330 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 60 297 IPR006379 -
Sto5g0658 330 ProSitePatterns Hypothetical cof family signature 1. 60 71 - -
Sto5g0658 330 PANTHER ENDORIBONUCLEASE YBEY, CHLOROPLASTIC 1 330 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0658 - - ccaj:109800113 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0658 5 4437625 4440602 Sto5g0658 5 4437625 4440602 ECH