Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0646 ATGAACCAGAAGACAATGGTGGAATCGGTTACCGTAAGGGTTCCGCAGAGTTCATCGTCATCGTCACTTCCGAAGATAAACCCCAAGGTCCGATGCAACCACCGCTCCGATTCTTGCTGTGCCCGGTTGATGATGCAGAACCACAACAACTTCAAGCGCAGCGCTGTCCCTAACCGATTCATGTTCTACCGTGGAGGGTCTTGGGTTGATTTCCAGAGCCAAGTGCGTGAGTCTTTGCGGTCGGGTTTCGTTGAGGATAAGCCGATCATTGAGGCGATGATTGGAGGGTCCAAGTATGTGTTTGACTTTCTGCGGATGGTGCAGATTGATTTTGGATCCGGGAATCAGAGATCTATTGCTTGGATCGATGAAAATGGCAAGCCCTTCTTTCCCAAGGTCTTTGTTGACGAGGACTTTATGAATGGGTTGGAGAATTCAGGAACTCCCAATATTGAGATTGAAATTAGGGTGGATGGGATGTCCTGTAAGAGAAAGTTCGAGCATTTAGACTTAGGTGTTGATGGGGCAAACAATGAGGTGAGCTCATCGATTAAGAATAACAAGCAAGGAGATGAAAATCAAGTGGTTGCTTCCAAAAGGCAGAGGTTGACCTCCATGGATTTGAAAACCTCTAAATGGCCCAATGCAAAATTGCTTAGTGAGGCAGACAAAGCGTATTCATTCATGAGTTTTTTATTCCTTTCTGAGGTCACCAAGACTTATCCTAGAACCATTATTTCTGCAATTCATAAATTTATATACTCAGGGCCACTTGAGAAAGCTCGTCGTGAAGTTTTTGAGAGGCATAACGAAAATAAAAAAGCTGCTCGAGGTGTGTCCAAAACAGGTTATGCTTGGTGTGGAGCATCATCAGCAGAAGCAATCGCGGGTATTTTAGCTCATGGGTTTGAGTTGCCTCGCAAAACATCTAGGTTTCCATCATATGGAGTCGGTATACATTTGTCCACTATAGGTTTTCCCCAACTCAGTGCTATGCAATCAGAGGTGGATAATAACGGTGAGAAGCATATCTTGCTCTGCCGTGTTATTTTGGGAAATATTGAGAAGGTGGATGCTGGGTCTCGGCAGTGTGGCCCTTCCAGTGTGGAATTTGACAGTGGAGCTGATGATCCTAAAAATCCCAGGTGGTATGTAGTTTGGAGCACTAACATGAACAGCCATATACTTCCAGAGTGTGTCATCAGCTTCAAATCCTCTACTCATTTGCCAGGTCAATTGTGGTCATGTAACAGGTCAAAGAATTCACTTGCAAATTTAATGATGAAGATAAAGAGTCATCTTCCTTCCCCCAAACTCATGGAAGTTGTTACTCTATGTGGTTCTTTACTGGCTGGAAAGCTGGCCAAAGACAATTTCATAAAACAGTTGCGGGACATTGCTGGTGACGAATTGCTTATGACCGTAATTCAGGAGATTCGAAGTTCAGGATGA 1452 0.4428 MNQKTMVESVTVRVPQSSSSSSLPKINPKVRCNHRSDSCCARLMMQNHNNFKRSAVPNRFMFYRGGSWVDFQSQVRESLRSGFVEDKPIIEAMIGGSKYVFDFLRMVQIDFGSGNQRSIAWIDENGKPFFPKVFVDEDFMNGLENSGTPNIEIEIRVDGMSCKRKFEHLDLGVDGANNEVSSSIKNNKQGDENQVVASKRQRLTSMDLKTSKWPNAKLLSEADKAYSFMSFLFLSEVTKTYPRTIISAIHKFIYSGPLEKARREVFERHNENKKAARGVSKTGYAWCGASSAEAIAGILAHGFELPRKTSRFPSYGVGIHLSTIGFPQLSAMQSEVDNNGEKHILLCRVILGNIEKVDAGSRQCGPSSVEFDSGADDPKNPRWYVVWSTNMNSHILPECVISFKSSTHLPGQLWSCNRSKNSLANLMMKIKSHLPSPKLMEVVTLCGSLLAGKLAKDNFIKQLRDIAGDELLMTVIQEIRSSG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0646 483 PANTHER OS03G0230300 PROTEIN 42 479 - -
Sto5g0646 483 SUPERFAMILY ADP-ribosylation 274 406 - -
Sto5g0646 483 Pfam RCD1-SRO-TAF4 (RST) plant domain 424 480 IPR022003 -
Sto5g0646 483 ProSiteProfiles RST domain profile. 414 483 IPR022003 -
Sto5g0646 483 SUPERFAMILY WWE domain 64 119 IPR037197 -
Sto5g0646 483 ProSiteProfiles WWE domain profile. 46 121 IPR004170 -
Sto5g0646 483 ProSiteProfiles PARP catalytic domain profile. 202 424 IPR012317 GO:0003950
Sto5g0646 483 Gene3D - 216 405 - -
Sto5g0646 483 Pfam WWE domain 65 119 IPR004170 -
Sto5g0646 483 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 42 479 IPR044964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0646 Sto-Chr5 4354293 4356042 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0646 - - jre:108993148 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0646 5 4354293 4356042 Sto5g0646 5 4354293 4356042 ECH