Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0645 ATGGCAATGGTCGGTGCTATGACGGCGACGGCGATTCTTGCTGTTGCAACGGCAACGATCGTCACTGGAAAATCCTGTGTCTCCGATTTGCGTGGCTCTCTCCCATCGATCGTCGTCGCCGGGAGTGCCGGGAGCTATTGCCTGGCCTTCATTGAGCTCATTTACTTGCGTTCATGCACGGAAAATCAAGCTTTAGATTCTGAAGCTGTGTCTCACTCTCTTTCTCAAATGGCATTGAACTTCTTTTGTAATAGGGGTGCTGTTATTTTCATAGTCATGTCAATTCCACTGACACCATCTAAGAGGCCAAATGATAGGAGCCTTGTAGAGCTAAATGGGAAAGGGAAGTGGCAGAAGACATCAGGCACTCATCTTCCAAGTCAACCCTTGAAAGTTTCCCCTGGAAGTGTTATCTTCCGTTTATTATGTCGTGTTTCCAAAATTGGCTGTGTTATTGGTAAAGGTGGCAGCATCATATCAGAAATTCGTCAGGAAAGTGGGGTGAAGGTTAAAGTTGAGGACACTATCCCTGGATGTGATGAAAGAGTTATTACTATTACAGGTTCTGATAAAGAGACTGTAGAAGATACTGAGCAGAACAAGGAGGTTTGTAGCGAAGAAACAGATAATAAGGCAAAGGGTGATGAGACCAAAGATCATAGTGATAATGATGACGATAAAGATACTCTTCTGGTTGAAGATTCGAATAGTGAGAAGGGAACATCATCTGTTCAGAAGGCTCTATTACTTGTTTTTGAGAAGATGGTTGAAGGAGAAGATGAGACAACAGAAGGTGATGGAGAGGGAAGCAGGTCTTCCTTTGTTCTGAGGCTTCTTGTCCTTTCTAATCAAGTTGGCTGCCTTCTAGGAAAGGGTGGCAGTGTAATCAAGCAAATGTCAGCTGACAGTGGGGCACAGATTCGGATTCTTCCCAGGGATAAACTTCCCTTATGTGCATCGGCTTCTGACGAGCTAGTTCAGATAACAGGGGAAGTTGATGTTGTGAGGAAAGCTCTTCAATCTGTTTCTCAACAGCTTTTGGAGAATCCACCCCGGGATCATGAATCTCTCTTAGCCAATGCTACCGGGCCATCTCATTCATTTAGTCAGTTCCCACCACCCAACCGTTCCTTTGGTGCTCCAGGAGTGCCTTATACTTCAGGGCCTCGTGATATTTCTGACTTTCACTCGGCTCCCCCTCCTCTGCTACACAAATTTCAGGATGGTGCTATCCATGGTCGAATGAGGCCTTCGCAAGAAATGTTGACTTTTCGTTTGTTGTGTCATGCTGAGAGGGTAGGAAGCATAATTGGTAAAGGTGGAGCAATCATAAAGACTGTGCAGCAAGAGACTGCAAGTGAAATCAAGGTTGTTGAAAGTGAATCTGATTTAGAGGATCGCATCATTGTTATATCTGGCCCAGCGCACCCAGATGATAGGATATCTCCTGTGCAAGATGCAGTACTGCGTGTGCAAACTAGAATAGTCAGAGCTATACCTGATGCCAAAGAGCATAGTATGTTAGCTAGGATTCTTGTTTCCTCCAATCAAATAGGTTGTCTGCTTGGCAAGGGTGGTTCCATAATAACTGAAATGAGGAAGTTGTCTGGGGCCCATATTCGTATATTAGGAAAGGATCAGGTTCCAAAGTGTGCTTCAGAAGAGGAAGTAGTTCAGATAAGTGGAGAAGTTGAGGCAGTGCAGGATGCTCTTTTGCAAATAACAACTAGACTACGGCACCATTTCTTTCGTGATGCATATCCATCAATCAACTATCCTTCAAATCCTGCATTTCTTGACCAGCTTCCACCTTACCCACCGTACATGGGAAGGAGGGAACTTTCACCTCCTGGAATGTATTCTAATCTAGGTCCTCCGTTTCACAAGTTTGATACTATTGGTGGTCCACCTCATGGTGGTTTTCCGCATGATGATCGTCCTCCTTTCATGCATAGTTTACCAAGACCTGGTGTTCCTCCCCACCTATCGGAAAGGAGGCCTTGGGGTCCTCAGGGGCTACATGAAGGTGGAAGACCCATGGGATTGCCAGATTTTGCAGGAGGCCCTCCTAGAAGAATTTCAGGATTTTCAGGAGTTAGCCAACAACCAATTATCACAAGCACCACTGTTGAAGTAGTTGTTCCTCGTACTATAGTGCCTATAATATATGGGGAAGATGGTGAATGTCTGAAACAAATACGCCagATCTCTGATGCCAAAATCACAATCACTGATCCAAAGCCTGGAGCAGTGGAAACTGCAATTATAATTTCTGGAACTCCTGAGCAGACTCATGCTGCACAGAGTCTTATTCAAGCATTTGTCATGAGTGAGAGGGAGTCTGGTTGA 2349 0.4496 MAMVGAMTATAILAVATATIVTGKSCVSDLRGSLPSIVVAGSAGSYCLAFIELIYLRSCTENQALDSEAVSHSLSQMALNFFCNRGAVIFIVMSIPLTPSKRPNDRSLVELNGKGKWQKTSGTHLPSQPLKVSPGSVIFRLLCRVSKIGCVIGKGGSIISEIRQESGVKVKVEDTIPGCDERVITITGSDKETVEDTEQNKEVCSEETDNKAKGDETKDHSDNDDDKDTLLVEDSNSEKGTSSVQKALLLVFEKMVEGEDETTEGDGEGSRSSFVLRLLVLSNQVGCLLGKGGSVIKQMSADSGAQIRILPRDKLPLCASASDELVQITGEVDVVRKALQSVSQQLLENPPRDHESLLANATGPSHSFSQFPPPNRSFGAPGVPYTSGPRDISDFHSAPPPLLHKFQDGAIHGRMRPSQEMLTFRLLCHAERVGSIIGKGGAIIKTVQQETASEIKVVESESDLEDRIIVISGPAHPDDRISPVQDAVLRVQTRIVRAIPDAKEHSMLARILVSSNQIGCLLGKGGSIITEMRKLSGAHIRILGKDQVPKCASEEEVVQISGEVEAVQDALLQITTRLRHHFFRDAYPSINYPSNPAFLDQLPPYPPYMGRRELSPPGMYSNLGPPFHKFDTIGGPPHGGFPHDDRPPFMHSLPRPGVPPHLSERRPWGPQGLHEGGRPMGLPDFAGGPPRRISGFSGVSQQPIITSTTVEVVVPRTIVPIIYGEDGECLKQIRQISDAKITITDPKPGAVETAIIISGTPEQTHAAQSLIQAFVMSERESG 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0645 782 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 504 587 IPR036612 GO:0003723
Sto5g0645 782 Pfam KH domain 510 574 IPR004088 GO:0003723
Sto5g0645 782 Pfam KH domain 140 196 IPR004088 GO:0003723
Sto5g0645 782 Pfam KH domain 276 342 IPR004088 GO:0003723
Sto5g0645 782 Pfam KH domain 709 772 IPR004088 GO:0003723
Sto5g0645 782 Pfam KH domain 423 475 IPR004088 GO:0003723
Sto5g0645 782 Gene3D K Homology domain, type 1 420 499 IPR036612 GO:0003723
Sto5g0645 782 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 129 194 IPR036612 GO:0003723
Sto5g0645 782 CDD PCBP_like_KH 510 575 - -
Sto5g0645 782 CDD KH-I 709 772 - -
Sto5g0645 782 ProSiteProfiles Type-1 KH domain profile. 136 201 - -
Sto5g0645 782 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 421 496 IPR036612 GO:0003723
Sto5g0645 782 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 93 641 - -
Sto5g0645 782 Gene3D K Homology domain, type 1 504 582 IPR036612 GO:0003723
Sto5g0645 782 Gene3D K Homology domain, type 1 271 351 IPR036612 GO:0003723
Sto5g0645 782 Gene3D K Homology domain, type 1 135 206 IPR036612 GO:0003723
Sto5g0645 782 SMART kh_6 505 579 IPR004087 GO:0003676
Sto5g0645 782 SMART kh_6 272 347 IPR004087 GO:0003676
Sto5g0645 782 SMART kh_6 135 213 IPR004087 GO:0003676
Sto5g0645 782 SMART kh_6 706 776 IPR004087 GO:0003676
Sto5g0645 782 SMART kh_6 420 493 IPR004087 GO:0003676
Sto5g0645 782 ProSiteProfiles Type-1 KH domain profile. 707 771 - -
Sto5g0645 782 MobiDBLite consensus disorder prediction 185 234 - -
Sto5g0645 782 CDD PCBP_like_KH 423 492 - -
Sto5g0645 782 ProSiteProfiles Type-1 KH domain profile. 506 574 - -
Sto5g0645 782 Gene3D K Homology domain, type 1 705 779 IPR036612 GO:0003723
Sto5g0645 782 CDD PCBP_like_KH 275 343 - -
Sto5g0645 782 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 93 641 - -
Sto5g0645 782 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 707 776 IPR036612 GO:0003723
Sto5g0645 782 ProSiteProfiles Type-1 KH domain profile. 273 342 - -
Sto5g0645 782 MobiDBLite consensus disorder prediction 183 240 - -
Sto5g0645 782 CDD PCBP_like_KH 139 189 - -
Sto5g0645 782 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 271 350 IPR036612 GO:0003723
Sto5g0645 782 ProSiteProfiles Type-1 KH domain profile. 421 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0645 Sto-Chr5 4344560 4352708 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0645 K21444 - qsu:112004419 959.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0645 5 4344560 4352708 Sto5g0645 5 4344560 4352708 ECH