Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0619 ATGGCTGTTTCAACCAGCGTCTCCGGTGCCAAATTGGAGGCCTTATTGCTCAAGTCTTCTTCCTCCTCGTCAAGGGCCTCCTCCGCCACCCGCGTATCGGTTTTTGGCAAACCCGGCGTCATTGAATTTAGAAGGACTTTGATTCAGAGAGGAGTAATTCGCTGCGAGGCTGCTGCTCATGATCCCATTAATACCACAAGCGTTTCTGCTCTTGAGCAGCTTAAGACTTCTGCAGCTGACAgatatacgAAGGAGAGGAGCAGCATTGTGGTCATTGGTCTCAGTGTGCACAGTACACCTGTGGAAATGCGTGAAAAGCTGGCCATTCCTGAGGCAGAATGGCCTCAAGCTATTGGGGAGCTGTGTGGTCTGAATCATATTGAAGAAGCAGCTGTTCTGAGCACCTGCAACAGAATGGAGATATATGTTGTTGCTCTATCCCAGCACCGTGGTGTCAAAGAGGTCACCGAATGGATGTCAAAGAAAAGTGGGATCCCTGTCTCCGAGCTTTGCCAGCATCGGTTCTTGCTTTACAACAAAGATGCTACACAGCATATTTTTGAAGTGTCTGCAGGTCTAGACTCTCTTGTATTGGGAGAAGGTCAAATACTTGCTCAGGTTAAGCAGGTTGTCAAAGTTGGACAAGGAGTTAATGGCTTTGGGAGAAACATCAGTGGGCTATTCAAGCATGCAATTACTGTCGGGAAGAGGGTTAGAACTGAAACTAATATTGCTGCTGGGGCAGTCTCTGTAAGCTCAGCTGCTGTTGAATTAGCCTTGATGAAGCTACCCGAAGCCTCGCATGATAATGCCAGGATGTTGGTTGTTGGAGCCGGCAAGATGGGAAAGCTTGTAATCAAACACTTGGTGGCTAAAGGTTGTATAAAGATGGTAGTTGTTAATAGAACTGAGGAGAGAGTTGCAGCAATCCGTGAGGAACTGAAGGatgttgaaattatatataaaccTCTCTCAGAAATGCTTTCCTGTGCCGGTGAAGCAGATGTCATTTTCACAAGCACTGCATCAGAAAACCCATTATTCCTGAAAGATCACGTTAAGGACCTTCCTCCTGCAAGTCAAGAAGTTGGAGGTCTCCGTCTTTTTGTTGATATCTCTGTTCCTCGGAATGTAGGTTCTTGTGTCTCGGATCTTGACGCTGTTCGGGTTTACAACGTTGATGACCTCAAGGAGGTTGTGGCTGCTAATAAAGAGGACAGGCTTAGAAAAGCAATGGAAGCTCAGGCAATTATTACTGAAGAATCAAAACAATTCGAAGCCTGGAGGGATTCACTGGAAACTGTTCCTACCATCAAGAAATTAAGGGCTCATGCTGAAAGAATCAGGGTTGCGGAGCTTGAGAAATGCTTAGGTAAGATGGGTGATGATATCCCAAAGAAGACTAGGAGAGCTGTAGATGACCTTAGCCGAGGCATTGTGAACAAGTTGCTCCATGGTCCAATGCAACACCTCAGGTGTGATGGGAGTGACAGCAGGACTCTAAGCGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTTAGCCTTGAGACTGAAATATCTGTTTTGGAGGAGAAGATTCGAGCCAAGGTGGAACAAAATCAGAAGTAA 1614 0.4554 MAVSTSVSGAKLEALLLKSSSSSSRASSATRVSVFGKPGVIEFRRTLIQRGVIRCEAAAHDPINTTSVSALEQLKTSAADRYTKERSSIVVIGLSVHSTPVEMREKLAIPEAEWPQAIGELCGLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKKSGIPVSELCQHRFLLYNKDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHDNARMLVVGAGKMGKLVIKHLVAKGCIKMVVVNRTEERVAAIREELKDVEIIYKPLSEMLSCAGEADVIFTSTASENPLFLKDHVKDLPPASQEVGGLRLFVDISVPRNVGSCVSDLDAVRVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAHAERIRVAELEKCLGKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEISVLEEKIRAKVEQNQK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0619 537 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 413 517 IPR015896 GO:0008883|GO:0033014|GO:0050661
Sto5g0619 537 PANTHER GLUTAMYL-TRNA REDUCTASE 1 537 - -
Sto5g0619 537 CDD NAD_bind_Glutamyl_tRNA_reduct 89 411 - -
Sto5g0619 537 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 411 497 IPR036453 GO:0008883|GO:0033014|GO:0050661
Sto5g0619 537 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 88 244 IPR036343 GO:0008883|GO:0033014|GO:0050661
Sto5g0619 537 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 1 537 - -
Sto5g0619 537 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 92 242 IPR015895 GO:0008883|GO:0033014|GO:0050661
Sto5g0619 537 Gene3D - 87 247 IPR036343 GO:0008883|GO:0033014|GO:0050661
Sto5g0619 537 ProSitePatterns Glutamyl-tRNA reductase signature. 185 208 IPR018214 GO:0008883
Sto5g0619 537 Gene3D - 248 400 - -
Sto5g0619 537 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 247 407 IPR036291 -
Sto5g0619 537 Pfam Shikimate / quinate 5-dehydrogenase 257 399 IPR006151 -
Sto5g0619 537 Coils Coil 300 320 - -
Sto5g0619 537 Hamap Glutamyl-tRNA reductase [hemA]. 88 515 IPR000343 GO:0008883|GO:0033014|GO:0050661
Sto5g0619 537 TIGRFAM hemA: glutamyl-tRNA reductase 89 497 IPR000343 GO:0008883|GO:0033014|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0619 Sto-Chr5 4095605 4097801 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0619 K02492 - gmx:100782247 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0619 5 4095605 4097801 Sto5g0619 5 4095605 4097801 ECH