Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0588 ATGCACGGTCGGCCTCGCAAAACTTTGGAACCAGCCGATGCAGAAGCTTTATCAGCCAAAGCTGAAAAGCTTCGTTCGCTTCAGTCTCTGTTCCTCGCCAATCACCATAATCGCATATATGATAAGGAGGCTCTGGAAGTGAGCGCGAAGTTACTTGAGATCAATCCTGAATCTTACACGGCTTGGAATTACAGAAAGCTCGCCGTTGAACACTGCCTCTCTCGGTCCGAGTCTAATCCTGACTCTGTTAAATCCATTTTCGATGAAGAACTCAAAGTGGTTGAGAGTGCTTTGAGACAGAATTTCAAGTCTTATGGAGCATGGCATCATCGAAAATGGGTACTAGACAAAGGTTATTCATCCATAGATAATGAATTACGCCTTTTGGATAGGTTCCAGAAGGCTGATGCGCGAAATTTTCATGCATGGAACTACCGAAGGTTCGTCTGTGCACTGATGCAAAGAACTGATGAAGATGAGTTAAATTACACAGAGCAAATGATAGGAACGAACTTTAGCAATTACTCTGCATGGCACAACCGTAGACCATTGTGTATCTCAGTTTGTAGAGTGGAAGCCAATGATGTTGACCCTTCAGGTGTACTTCTGTCTAATTTGATGAAAAGAAAGGCTGAAGGATATTTCCCTAAAGAGATAGTCTTGGAAGAGGAGTATAATCACGTTCAGAATGCTCTTTTTACTGATCCAGATGATCAGAGTGGCTGGTTTTATCATCTGTGGCTTATTGATCAAACAGTGAAATCCGATGCTCCCTTACTTGTATCATCATGGCCTTCCCCTGGATCTACTATCACTCTAGACGGAAACAAGTGCCTTCATGGTTGTGGTTCATCTCCCTTGTATTGTACACTGTTGGATACTGGAATACTTCCTgtcattctttattttaatcaagCTGTTGAAGGTATCAACTCATCCACGGTGACTGTTAAGTCTGAACTTACTATAAATGAGGATCTTGTTTGGAAACCACTTtcaacaaacaaattaaatactgCTCGAGTTTGGGTTATGTATCTAAACCTTGGAAATGTGAAGCTTCAATTGTCAAAAACTTACCCCATAGAAATCAGCCTTGGACATTCTCAGGGTATTGTGTCTTCAAGTGGTTATCATTATAGCCATCCTTCCCAGATTTCCTTTAAGTTGTCTGTGCAGAATGCTTACACAGAACTTCCTGATGGCAAGGGTGGAAAATTGACTTTGTGGGAGAATAAAAATTTCCAAAAGTTTGAGCATTTTCAGGAAGTAGATTCCATTATTTCTGGTGGTCAGCTAATAACTGGCATTGACCATATTCCAACAACATCCAATTGGTCTGCAGAGACTATTGATAATGAAATTAATGCTTTTCGAGTTTTATTGTCTGAGAGTGACTGTAAAATTGGAAAGCTCACACTTGCTAGATTGTTAACTGCTTACGATTCAATATCATCTCCACATGCAAAAGGAATGATTCATGCTGAAGAAATTCTTGAACTTTATGCTGATCTATTGAAGTCGGATCCAATGCATTCTCTTTACTACAAGGATGAACGTAGCCTAGTATTACTGCAGCAGATAACTTCAACTACGGAGTCCTTGCTACAATACTGCTACCACTACAGAGGCATTACAGAGACTCTTGATGGTTTTGTCTGTCTACGATTACAAAATCTATCGTTGTCCCGGATGGGTTctcttgaaaatttgttgtgggTGCAAATGCTAGACCTCAGCCACAATGAACTTCGATCTATTGAAGGATTGGAAGCCATGCAACTTCTCTCTCGCTTAAATTTGAGTCACAATAAAATTGGTAGCTTTACTGCTCTTGGACCTCTCAGACTTCTCAAGTCACTAAAAGTGCTAAATATCTCGTATAATGAGATAGGCTCTCACTCTATTGACACGGCAAGATACCTATGCTCTTCTCCATTGTCTCATACCGAAGAATTTGGTTGGGACCGTTTTGAAATCCTTAATGCCAACATTGATGCCGCAAATATTTGGGAAGCTTTCCTGATATTTAAAAGCTTGAACTTGACACAGTTGGACGTAACTGGAAATGCAGTTGCTGATGAGAACTTCAGGTCATTTCTTGTGAAAATTTTGCCTACCCTTAAGTGGCTGGATGGTGAATTGCCCTGA 2151 0.3966 MHGRPRKTLEPADAEALSAKAEKLRSLQSLFLANHHNRIYDKEALEVSAKLLEINPESYTAWNYRKLAVEHCLSRSESNPDSVKSIFDEELKVVESALRQNFKSYGAWHHRKWVLDKGYSSIDNELRLLDRFQKADARNFHAWNYRRFVCALMQRTDEDELNYTEQMIGTNFSNYSAWHNRRPLCISVCRVEANDVDPSGVLLSNLMKRKAEGYFPKEIVLEEEYNHVQNALFTDPDDQSGWFYHLWLIDQTVKSDAPLLVSSWPSPGSTITLDGNKCLHGCGSSPLYCTLLDTGILPVILYFNQAVEGINSSTVTVKSELTINEDLVWKPLSTNKLNTARVWVMYLNLGNVKLQLSKTYPIEISLGHSQGIVSSSGYHYSHPSQISFKLSVQNAYTELPDGKGGKLTLWENKNFQKFEHFQEVDSIISGGQLITGIDHIPTTSNWSAETIDNEINAFRVLLSESDCKIGKLTLARLLTAYDSISSPHAKGMIHAEEILELYADLLKSDPMHSLYYKDERSLVLLQQITSTTESLLQYCYHYRGITETLDGFVCLRLQNLSLSRMGSLENLLWVQMLDLSHNELRSIEGLEAMQLLSRLNLSHNKIGSFTALGPLRLLKSLKVLNISYNEIGSHSIDTARYLCSSPLSHTEEFGWDRFEILNANIDAANIWEAFLIFKSLNLTQLDVTGNAVADENFRSFLVKILPTLKWLDGELP 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0588 716 SUPERFAMILY L domain-like 546 632 - -
Sto5g0588 716 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 626 - -
Sto5g0588 716 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 220 254 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Pfam Protein prenyltransferase alpha subunit repeat 88 116 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Pfam Protein prenyltransferase alpha subunit repeat 123 151 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Pfam Protein prenyltransferase alpha subunit repeat 158 182 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Pfam Protein prenyltransferase alpha subunit repeat 221 251 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Pfam Protein prenyltransferase alpha subunit repeat 42 71 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Pfam Leucine Rich repeat 620 632 IPR001611 GO:0005515
Sto5g0588 716 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 40 74 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 PANTHER - 1 626 - -
Sto5g0588 716 Gene3D Protein prenylyltransferase 1 263 - -
Sto5g0588 716 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 86 120 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 Gene3D Ribonuclease Inhibitor 539 715 IPR032675 -
Sto5g0588 716 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 121 155 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 SUPERFAMILY Protein prenylyltransferase 20 528 - -
Sto5g0588 716 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 156 190 IPR002088 GO:0008318|GO:0018342
Sto5g0588 716 ProSiteProfiles Leucine-rich repeat profile. 595 616 IPR001611 GO:0005515
Sto5g0588 716 ProSiteProfiles Leucine-rich repeat profile. 573 594 IPR001611 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0588 K14050 - gmx:100807900 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0588 5 3807973 3812201 Sto5g0588 5 3807973 3812201 ECH