Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0579 TTGGAGTCCATAGCTGCTTTGTCTTCGACCTCCATTTTTAGGCCTCCGGCGTCGTCCTTCTCCGGCTACTCTGTTTCCAGTACTCGACCTCGCTTTCCATTGACCTTGAGAATGAAAGCTGTTCACGGCTCAGAGAATGCGCCTCAGGCTGACCCCCCAAGCCCAAGGAAGCTAAGCTATGGGGAGGCCGATTTGAGGACAGTGTCACTGATGCCGTTAAGAGATTCACAGAGTCGATCTCCTACGATAAGCAGCTGTACAATCGTGACTGATTTTCGCCTCTGGTGTCGCGATGCCATTGATAAGATCCTTGCACGCATAAAACACCTTCAGGTGTCACTGGTGACCTTGGCTTTAAAGAATGAAGGTCTTATTGTACCTGGTTATACACATTTACAGCGTGCCCAACCAGTTTTACTTCGACATCTTCTACTGGCATATGCTGAGGAGCTTGAGCGTGATGCTGGTCGTTTAGTAGATTATAGAGCCAGGATGAATTTCTGCCCCTTAGGAGCTTGTGCACTGGCCGGTACTGGGCTCCCCATTGATGGATTCATGACCTCAGATGCTTTAGGATTTACTGCTCCATTGAGAACTAGTATTGATGCAGTTTCAGACCGGGATTTTGTATTGGATTTTCTTTCTGTTAATGCCATTACAGCAGTTCATCTTTCTCGGCTTGGTGAAGAATGGGTATTGTGGGCTACAGAACACTAA 717 0.4756 LESIAALSSTSIFRPPASSFSGYSVSSTRPRFPLTLRMKAVHGSENAPQADPPSPRKLSYGEADLRTVSLMPLRDSQSRSPTISSCTIVTDFRLWCRDAIDKILARIKHLQVSLVTLALKNEGLIVPGYTHLQRAQPVLLRHLLLAYAEELERDAGRLVDYRARMNFCPLGACALAGTGLPIDGFMTSDALGFTAPLRTSIDAVSDRDFVLDFLSVNAITAVHLSRLGEEWVLWATEH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0579 238 PRINTS Argininosuccinate lyase family signature 77 99 - -
Sto5g0579 238 PRINTS Argininosuccinate lyase family signature 169 185 - -
Sto5g0579 238 PRINTS Argininosuccinate lyase family signature 118 138 - -
Sto5g0579 238 PRINTS Argininosuccinate lyase family signature 207 231 - -
Sto5g0579 238 Pfam Lyase 87 232 IPR022761 -
Sto5g0579 238 PANTHER ARGININOSUCCINATE LYASE 87 237 - -
Sto5g0579 238 SUPERFAMILY L-aspartase-like 87 236 IPR008948 GO:0003824
Sto5g0579 238 Gene3D Fumarase/aspartase (Central domain) 86 238 - -
Sto5g0579 238 PRINTS Fumarate lyase superfamily signature 207 234 IPR000362 -
Sto5g0579 238 PRINTS Fumarate lyase superfamily signature 123 141 IPR000362 -
Sto5g0579 238 PANTHER ARGININOSUCCINATE LYASE 87 237 IPR009049 GO:0004056|GO:0042450
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0579 Sto-Chr5 3739050 3740838 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0579 K01755 - gmx:100796544 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0579 5 3739050 3740838 Sto5g0579 5 3739050 3740838 ECH