Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0573 ATGAACAAGTCTCCGCGCAGAGATCTCCAAGTTTCCGATTTGAAGGAAGACGAAGAGAATGTTGACATTGTCCCTGCCAAGCAGCCTCCGGAATTCAGGAACCCTAGCCTTGATGATCAATCCGTCTTGAAGTACGAGTTTCTTGGATACGTTTCCCAGGTAGAACAGGTTAGCAAAAAGGATGCTTTTATTATTCCTTGTGTTGATGTTGATATTGATGCGATTGGTGGCAATTTTAATTTGGAGAAGGGTGTCTCAGACCCACCCCTGGGCACATTGGAAGAGAAGAATTCTGAGTTGGAAGCTGTCCAACAATCAAACTCCGTTTGTCTTGAAAATGACCCTGGTTCTAAATTGGATATTCATAGATATAATGGTTCTATTGAAATAGATACAAAAGACAATAGTGATGGTGTACATGTACAAGAGTTGAGTGAGATGGAAATGGCTCCGTCAGGATCTCCATCCAGAaTTGAATTTGTTGATGCTACTTCAGAAGCTGATGAGCGCGTGAATGAGAGTACTCCATCAAGTTCTGCATCTGATATTGCAGAGAATgTTTCATTGAACGGTCCTGGATGGAACCATTGCATAGGCTATTCTGACATGGAAGATATGAATACGGAAGTTGTTCTTTATCCTGACTATGTCATATACCAGGATAATTATTATATAGGATCGAAGTTAACGTTTTCACATTGCTGCATCAAGATCAATGGTTCAATTGAATGTATAAACCAAGGGGCCATTAATCTTGAATGGGCAGCTGATGATCTCATCGATATTAAGTGTCAATTGTTTCAAAGTAATGGAAAGATCTTGGTCAAGCTTCATGTTATATCAAGTAATGAAGGTCactcaaaaaattttaacagtTCTTCAGGCACTGGAGATTTGAAGATTGCATTTGTTGATTCCAATTGGTCTCTAAGACATCAACAGATCACATCTCTTAATGTGAAATATTCTGATATTTGGAACATTGTTCTTGATACTGACAtggaagggaatgaaaatattttgCTTGGATCAAGATGCTACTTCCCCAATTTCGATGAGCCTTTTGATGAAGTTATATATCCAAAAGGGGATCCTGATGCTGTTTCCCTGACTAAGAGGGATGTTGATCTATTACAACCAGACACTTTCATCAATGACACAGTTATTGATTTCTACATTAATCTTCACTGGAGTTTAATAGTCATATGTCATCCTGGTGACGTGGTTAGTTTTAATGGTGATGAACTGGACAAGCCACTTAAAGTACCTTGCATATTGCATATGGATTCCATTAAAGGGAGTCATAGTGGTCTGAAAAACCTTGTCCAAAGTTATTTGTGGGAAGAATGGAAAGAGAGGCAAAAGGGTACACATGAAGACCTTTCTTCAAGATTCTTGAATATGCGATTTCTCCCCCTCGCGTTGCCGCAGCAAGAAAACTCATTTGATTGTGGCCTTTTTCTGCTACACTATCTGGAGCTGTTCCTTGCTGAAGCTCCTGCTAATTTCAATCCATTCAAATTAACCAAGTTCTCTCACTTTCTCAATGTGGACTGGTTTCCACCTGCAGAGGCTTATCTCAAACGAACTCTTATCCAGAGGTTAATCTTTGAACTTCTGGAAAATCGTCCTGGTGAATTTTCTTCTGCATACACTGATCGACACTACTCAGAAAATGACAACAGAAATGGTGTAGAGTTTCTTGGACGGAGGTGTAGTCCTGAAATCAATGGGGAATCAACTACTTCCCATGATAGCCAGGGAATAGAAATCACTCTATTATCAGCATCATCATCTTTGGATCCTCATTCTTTAAATAATTCAGGCTTGGTTCTAAGGGAGCTTTTTGAGCCAGGGGCTGGAGCAGGAGAATTGCTGGGACAGTGCCAATCTTTTGACCACAGGCCATCTGATTACCGTCTCAGTGGTTCACTATTTCCAATTGAGGAAGAAACAGAAACCAGTGAGCACTTTATGTATTTGACAACAGAGGCTAAATTCCAGCAAGATATTCCTCAAACATGTGAATTTTCATACACATCTAGAGGTTGTGGAGCTGATACCTGTCACAGACCAGAAATCTCTCCGCTAGCAGAAGATGACAAGGCTGAATCATCCTTGGATACAAGTTGTGCATCAGATGACTCAGATGATATTGGGATCATTGAAAATTGTCCGACTGTAAATGAAGCAGAGTCATCCGAGGAAGCTAAACAACATGGAAAAAATTGCCTATCAATGGAAAACTTGGAGTTTTCTGCAGAAATTGCTGGTTCTGCTGCTTGCAACTTGCCACTGTCAAGAGATTCCGATACCGTGTGTAATAGCAGCAAGAGTGGACTTGTCAACTCTTGCTGTGTAGAAACTGCAACAACGCCGTTGCATGAAGCTTCTGATGCAGTAGAGGACAAGGTTTCATTTGATGATGTCCAGACGGTTAACCTTGTGGTAACAGATCTTTGTGATGAACAAGCTGCTAAGAGGAGGCGGGTTTTACCCATGGACTGTGAAAGCAATACTGTCGGAACGCTCACCCAAGAATCCCATCCGTAA 2553 0.4027 MNKSPRRDLQVSDLKEDEENVDIVPAKQPPEFRNPSLDDQSVLKYEFLGYVSQVEQVSKKDAFIIPCVDVDIDAIGGNFNLEKGVSDPPLGTLEEKNSELEAVQQSNSVCLENDPGSKLDIHRYNGSIEIDTKDNSDGVHVQELSEMEMAPSGSPSRIEFVDATSEADERVNESTPSSSASDIAENVSLNGPGWNHCIGYSDMEDMNTEVVLYPDYVIYQDNYYIGSKLTFSHCCIKINGSIECINQGAINLEWAADDLIDIKCQLFQSNGKILVKLHVISSNEGHSKNFNSSSGTGDLKIAFVDSNWSLRHQQITSLNVKYSDIWNIVLDTDMEGNENILLGSRCYFPNFDEPFDEVIYPKGDPDAVSLTKRDVDLLQPDTFINDTVIDFYINLHWSLIVICHPGDVVSFNGDELDKPLKVPCILHMDSIKGSHSGLKNLVQSYLWEEWKERQKGTHEDLSSRFLNMRFLPLALPQQENSFDCGLFLLHYLELFLAEAPANFNPFKLTKFSHFLNVDWFPPAEAYLKRTLIQRLIFELLENRPGEFSSAYTDRHYSENDNRNGVEFLGRRCSPEINGESTTSHDSQGIEITLLSASSSLDPHSLNNSGLVLRELFEPGAGAGELLGQCQSFDHRPSDYRLSGSLFPIEEETETSEHFMYLTTEAKFQQDIPQTCEFSYTSRGCGADTCHRPEISPLAEDDKAESSLDTSCASDDSDDIGIIENCPTVNEAESSEEAKQHGKNCLSMENLEFSAEIAGSAACNLPLSRDSDTVCNSSKSGLVNSCCVETATTPLHEASDAVEDKVSFDDVQTVNLVVTDLCDEQAAKRRRVLPMDCESNTVGTLTQESHP 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0573 850 MobiDBLite consensus disorder prediction 1 24 - -
Sto5g0573 850 ProSiteProfiles Ubiquitin-like protease family profile. 308 495 IPR003653 GO:0006508|GO:0008234
Sto5g0573 850 SUPERFAMILY Cysteine proteinases 360 539 IPR038765 -
Sto5g0573 850 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 394 841 - -
Sto5g0573 850 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 120 394 - -
Sto5g0573 850 MobiDBLite consensus disorder prediction 1 36 - -
Sto5g0573 850 MobiDBLite consensus disorder prediction 164 185 - -
Sto5g0573 850 Pfam Ulp1 protease family, C-terminal catalytic domain 383 505 IPR003653 GO:0006508|GO:0008234
Sto5g0573 850 MobiDBLite consensus disorder prediction 170 185 - -
Sto5g0573 850 Gene3D Adenoviral Proteinase; Chain A 393 520 - -
Sto5g0573 850 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 394 841 - -
Sto5g0573 850 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 120 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0573 Sto-Chr5 3689083 3696916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0573 K08596 - gmx:100800444 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0573 5 3689083 3696916 Sto5g0573 5 3689083 3696916 ECH