Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0562 ATGGGTGGTCATATCATTCTCAACTTCATCACCACCTTAATTCTTCTCTTCGCAATTCACCTATCTACCTCCATAGCCCTCGACCCATGTGCTTCCAACCCCGACGATTCGGACCTCACCGTCATACCCATATACGGCAAATGCTCACCCTTCAACCCACCCAAAACAGACTCCTCATGGCCCAACACCATCATCAACATGGCCTCTAAGGACCCTGCTAGGCTCAACTACTTGTCCACCCTCGTGCCCCAAAAGTCCGTTTCCTCCGCCCCAATTGCCTCGGGTCAACCCTTCAACATCGGCAGCTATGTGGTTCGGGTCAAAATCGGCTCCCCGGGTCAACTCATGTTCATGGTCCTCGACACCAGTAGTGACGAGGCCTGGGTCCCATGCTCCGGTTGTACCGGCTGCTCCGCCACCACATTCTCCCCCACCACTTCCACCTCTTACGGCTCCTTGGGTTGCTCCGACCCGCATTGCAGCCAGGTCCGCGGACTCTCCTGCCCCGAAACCGGAACCGCTTTCTGCTCTTTCAACCAAACTTACGCGGGTTCATCCTTCGCGGCCACGCTCGTGCAAGATTCCCTAAGGTTAGCTACTGACGTCATTCCCAATTACTCTTTCGGGTGCGTCAACGCCATCTCCGGTGGGTCAATTCCGGCCCAAGGGTTATTGGGCCTGGGACGTGGGCCTTTGTCTTTGCTTTCTCAGTCCGGATCTCTTTACTCGGGTGTGTTCTCCTACTGCCTACCAAGTTTCAAGTCCTACTACTTCTCCGGGTCGCTCAAATTGGGACCCGTTGGTCAACCCAAGAGCATTCGGACTACCCCGCTTTTGAGAAACCCGCACCGACCATCTTTGTACTACGTGAACCTGACCGGAGTGAGCGTCGGGCGGGTTCTGGTGCCTTTGGCGAGTGAGCTTTTGGCGTTCAACCCGAATACGGGAGCCGGAACCATCATAGATTCGGGCACGGTGATAACCCGGTTTGTTGAACCGGTGTATAATGCAATAAGGGACGAGTTCAGGAATCAAGTGAAGGGTACATTTTCGAGCTTAGGAGCATTTGACACGTGCTTCATTAAGACGTATGAGACATTGGCTCCCACAATTACATTGCATTTTACAGGTTTGGATTTGACTCTGCCAATGGAGAATAGTCTCATCCATAGCAGCTCAGGTTCCTTGGCTTGTTTGGCTATGGCGGCGGCACCCAATAATGTGAACTCTGTGTTGAATGTTATTGCCAACTTGCAGCAGCAGAACCTTAGGATTATGTTTGATACTGTTAATAATAGGGTTGGCATCGCTCGTGAGCTATGTAACTAG 1329 0.5245 MGGHIILNFITTLILLFAIHLSTSIALDPCASNPDDSDLTVIPIYGKCSPFNPPKTDSSWPNTIINMASKDPARLNYLSTLVPQKSVSSAPIASGQPFNIGSYVVRVKIGSPGQLMFMVLDTSSDEAWVPCSGCTGCSATTFSPTTSTSYGSLGCSDPHCSQVRGLSCPETGTAFCSFNQTYAGSSFAATLVQDSLRLATDVIPNYSFGCVNAISGGSIPAQGLLGLGRGPLSLLSQSGSLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGVSVGRVLVPLASELLAFNPNTGAGTIIDSGTVITRFVEPVYNAIRDEFRNQVKGTFSSLGAFDTCFIKTYETLAPTITLHFTGLDLTLPMENSLIHSSSGSLACLAMAAAPNNVNSVLNVIANLQQQNLRIMFDTVNNRVGIARELCN 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0562 442 Gene3D Acid Proteases 266 442 IPR021109 -
Sto5g0562 442 Pfam Xylanase inhibitor C-terminal 288 437 IPR032799 -
Sto5g0562 442 PANTHER ASPARTYL PROTEASE AED3-LIKE 15 442 - -
Sto5g0562 442 ProSiteProfiles Peptidase family A1 domain profile. 103 437 IPR033121 -
Sto5g0562 442 Gene3D Acid Proteases 79 265 IPR021109 -
Sto5g0562 442 SUPERFAMILY Acid proteases 97 441 IPR021109 -
Sto5g0562 442 Pfam Xylanase inhibitor N-terminal 103 265 IPR032861 -
Sto5g0562 442 PANTHER ASPARTYL PROTEASES 15 442 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0562 Sto-Chr5 3600538 3601866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0562 93 442 Miscellaneous Gene Families AT1G77480 28.205 7.38e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0562 - - gmx:100788630 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0562 5 3600538 3601866 Sto5g0562 5 3600538 3601866 ECH