Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0546 ATGTCAAAGAACTGCCCGGATCTAGTAGTGTTTCGTCTTTGTATCATTGGGCGATACCGGCCCGATCCTGAGACTGGAGAACCCATGGATGAGGGTTTTGGTGCTATTGTTATGAACTGCAAGAAGCTCACTCGACTTGCTGTATCTGGTTTACTGACTGATCGAGCATTTGATTACATTGGGAGATATGGGAAACTGATTAGGACACTGTCAGTTGCCTTTGCTGGGAACACTGACATGGCCCTTAAATATGTTCTAGAAGGATGCCCTAATCTGCAAAAACTTGAAATCAGGGACAGTCCATTCGGGGATGGAGCTTTGCGTTCTGGGTTGCATCATTATTACAACATGAGGTTTCTGTGGATGTCATCTTGTAGACTGACTCGCCAAGCCTGCCAAGAAGTTGCGCGGGCATTGCCTCATCTGGTGTTGGAAGTGATTGGGTACGATGAGGAGAGAAATGTGGATGATAGCGTTGAAATATTGTACATGTACCGGTCACTTGATGGACCAAGAGACGATGCTCCAAATTTTGTTACCATCCTGTAG 549 0.459 MSKNCPDLVVFRLCIIGRYRPDPETGEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFDYIGRYGKLIRTLSVAFAGNTDMALKYVLEGCPNLQKLEIRDSPFGDGALRSGLHHYYNMRFLWMSSCRLTRQACQEVARALPHLVLEVIGYDEERNVDDSVEILYMYRSLDGPRDDAPNFVTIL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0546 182 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 1 181 - -
Sto5g0546 182 PANTHER F-BOX PROTEIN FBX14 1 181 - -
Sto5g0546 182 Gene3D Ribonuclease Inhibitor 1 182 IPR032675 -
Sto5g0546 182 SUPERFAMILY RNI-like 28 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0546 Sto-Chr5 3473236 3473784 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0546 - - gmx:100775877 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0546 5 3473236 3473784 Sto5g0546 5 3473236 3473784 ECH