Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0518 ATGAGAAATGAGAGAATAAAAGAAAACCTGAGCAGATTTGTAAGCGGTGAGAGTGCTTTCGGCAGCCTCCTTGCGCTCGGCTCCTGTCTTGAACTCTGCAAGGTACCTATGGTAATCGCCCTTCATCTTGAGGTAAAAGACCTTGGAATCACCAGAAGAAGCGGAGGGGATGAGGCGTGTATCGAGGAGTTTGAGGATCCCATCGCAGATGTTGGAGAGCTCAGTCTCGATCTTGGATCGGTAGTCACGGATCATGTTGACATGATCCTCGTTTCCTCGGCTCTCCTCCTTCTGCTCGATGGAGGAAATGATACGCCAGGAGGCACGGCGAGCACCGATGACGTTCTTGTAGGCGACAGAGAGGAGGTTCCTCTCCTCAACAGAGAGCTCTTCTTTCTCGACGGCGGCGGAGACCTTCTCCATGAACTCGACCATCTCTTCGTAGCGCTCGGCTTGCTCAGCAAGCTTCGCCATGTAGACGAACTCTTCGCGAGGCGAGGGAGCGGCCGCCATTGTCGAATGGGGAGAGAAATAGAAGCTAAAGATGTTCGAATAGATGAGATGGGTGGCAGCGAAAGATTGCTTTGTGGACAAAGCTTCTCGGACATTACATACATTCATATACATGAATGTGACTTTGTCTCTATAGGAGTGTTCTGTTTACCGGCAGGAAAGGTATTCCCACTTCATGATCACCCGGGGATGACAGTGTTCAGCAAAATCCTATATGGCTCTGTCTACGTCAAAGCTTATGATTGGATCAAACTGGATTCTACTAATGCCTCCCAAACATTAGGATTGGCGGGGAAAGTAATAGATGGAATAATGAAAGCACCAGATCAGGAGACATCGATATTATTTCCAGCAAGTGGTGGCAACATTCATAGTTTCACAGCGTTGACGCCATGCGCTATACTGGACGTGCTGTCTCCACCATATTCTCAAGACTTGGGGAGGCCTTCCACTTACTTCTCTCATTTCCCTCTTCCTTCCCTTCCTGGTTATGCCATGCTTGAGGCCACACCTCTGCCTACTGATCTAACAGTGAAAGGAGCGCCATATCTTGGACCTCCCATTGAGTTGAAGAATGCTTTCATAGACTCTCACAGTCGGTCTCCATCCAAGTCATCAGTAAGAAATTTAGGGTATATATTTGTGAATATTGAGCTGAGCTTGTTCACTGGAAATGCTATGTCAGGACGTGTAGTGACAAGATATTGTAAGGACCCAATTGCTTGTCGAAACAGAGAGGGATTCTTCATTGGGACACCTTCATTTGCTACAAAAGGATCACGTGTAGAGGGTGTAGTAGATTCAGAAGCATTTTCAGCTCCATCTCGGCTGCCACGTGGAGCAGACTCACGTGACGAAGGGCAGTTTTCATTTTCAGATGAGCTTGGGTTTCATCTATTAAGGAACCCTTGA 1425 0.4772 MRNERIKENLSRFVSGESAFGSLLALGSCLELCKVPMVIALHLEVKDLGITRRSGGDEACIEEFEDPIADVGELSLDLGSVVTDHVDMILVSSALLLLLDGGNDTPGGTASTDDVLVGDREEVPLLNRELFFLDGGGDLLHELDHLFVALGLLSKLRHVDELFARRGSGRHCRMGREIEAKDVRIDEMGGSERLLCGQSFSDITYIHIHECDFVSIGVFCLPAGKVFPLHDHPGMTVFSKILYGSVYVKAYDWIKLDSTNASQTLGLAGKVIDGIMKAPDQETSILFPASGGNIHSFTALTPCAILDVLSPPYSQDLGRPSTYFSHFPLPSLPGYAMLEATPLPTDLTVKGAPYLGPPIELKNAFIDSHSRSPSKSSVRNLGYIFVNIELSLFTGNAMSGRVVTRYCKDPIACRNREGFFIGTPSFATKGSRVEGVVDSEAFSAPSRLPRGADSRDEGQFSFSDELGFHLLRNP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0518 474 SUPERFAMILY RmlC-like cupins 201 324 IPR011051 -
Sto5g0518 474 PANTHER UNCHARACTERIZED 177 363 IPR012864 GO:0016702
Sto5g0518 474 Pfam PCO_ADO 177 359 IPR012864 GO:0016702
Sto5g0518 474 PANTHER OS09G0471000 PROTEIN 177 363 - -
Sto5g0518 474 Gene3D Jelly Rolls 192 327 IPR014710 -
Sto5g0518 474 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Sto5g0518 474 CDD cupin_ADO 212 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0518 Sto-Chr5 3299265 3305913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0518 K23953 - gmx:100811165 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0518 5 3299265 3305913 Sto5g0518 5 3299265 3305913 ECH