Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0501 ATGCAGAAGTTAGGATTCTCTAGCTTGAAGAGTCTGGATAAGTTCAAATCGTTGTATGGCTCAGCATCGGAAACTGCGAAGACATCGTCGTTCTCTTCACGTCCTTCCACAGATTCTATCTCATTGGGAAGTTTTGCGAATCTGAAACTCACCGCAGAGAAACTGGTAAAAGAGCAAGCTTCTGTAAAGACTGATCTGGAAATTGCGAATGTGAAACTAAAGAAATCATTGGAGCATGTCCATGCATTAGAAGAAAAATTGCAGAATGCTTTTAACGAAAATGCCAAACTCAAGGTCAAGCAGAAAGAAGATGAAAAACTCTGGAAAGGATTGGAGTCTAAGTTGTCATCAACAAAGACTTTGTGTGATCAACTCACTGAGACTTTGCAGCAGCTATCTAATCTAGTTCAGGCTGCTGACAAAGACAAGGAGAATTTAGAGAAAAAACTTTCAACAAGTTCAGAAGCTCTTGATAGtttgaataaaaatatggaTGATCTATCTTTGAAGCTAGATTCCGCAGAGGAAATAATTAGAACTTGTAACAAGGTGATAGCGGAGCTCAAATTTGAGTCACAAGAAAAGGAGAAGGTACATAAAGATGCTCAGGAAAAAGCTGCCAATCTTTTAAAGGAGAAAGATACTATGATAAAGAACTTAGGTGAAACGTTAGCAGCCAGTACACTTACCATAGAGAGTTTAAATTCGAAGTTGGGAGAGATAAACCTTCAATTAGAAGTCAAAGAAGATGAAATTATGCATCACAAAACCACTCAGGAGAAATTGGAGAAAGAAAAGGGTGATCTTCAATTGTGTATTGCTGAGATTACTAAAAAACTGGACATGTCACTTCGGGAAACCAAAGACCTTGAAGAATTGGTTCAAGCCTTGGCTGCAAATTTGGTTCAATTAGATAAAGAAAGCTTGAACTTTTTGAGCAAGTTTGATGAACTGAATTGTCTCTATGCTTCTTGCTTCAAGTTGGTCCAGCAGGAGAGAGATGCCTTTTCTAAGCATGCTCAAACTCGATATGATGAGCTTCATAATAAATTCTTGAACTTGACATCAGAAAAAAATGCAATTCAGTTGATAAATCAGGACTTAAACATTGACATGACTAAACTTCAGAAGGTCCTAGAGTGTACTACAGCCCAGAATGCAGATGATTGCCGATTAGCTGCCGAAAGAATTCAATGCCTGGAGTCAGAAGCTCAAACTTTAATCTCAAGGAAAGCAGATGCAGATACATTAATTTCCAAATTAGAGGAGAAAGTCGAAATTCTTTCAGATAGTTCTAGATCATCAGAGAACCAAATGCAAGGTTTATTGCTGAAACTTTCGGAATTAGAAACTGAAAGCAAAGAAAATACAGAGAGACTGCAGGAAGAGATACTGAAGAAATCAGAGGAAATAGATAGTTTGAAAAAGGAGGTGATAAAACGTGAGCAGCATGAAGATTTTCTGGAGAAACAAGTAACCCAGATTCATAATGTCTTAGAGGAGAAAGAACAGCTTATTTTGCAGTATAAGGAGCAAGAAAAGAAGCTGGAAGATCAGATCACAGAGAATCATTCATCATTGACTGCTGCTGAATGTAAACTATTAGAAGCTAAGAAGCAATATGATCTAATGGTAGAGAATAAACAGTCGGAGTTATCAAGGCATTTGAAAGAAATTTCTCAGAGAAATGATCAGGCTATTAATGACATTAGGAGGAAGTACGAGCTGGAGAAGATGGAAATTGTCAATATGGAAAAAGACAAGGTTCACAAGGCTATTGCAGATATAGAGGGAAGATGTGACCAAAAACTTGCAGATTGTAAAGAAGAATCAAGGCAGCAATTGATGCGCATTCAGGAGGAACATGTGACGTTGGTTACTCAAATACAGCAAGAGCATGACAAGAAGCAACTATGCCTTATAGCTGAGCATAATGAACAGCTAAAGCACGCCCAACTGCAAGCTGAAAATGAACTGAGAGAGAAAACGTTGTTCCTACGGAATGAACATGAAGCTCAGATGAAAGCATTGAGGTGTGAACTTGAAGACGAGTGTCAGAAGCTGCAAGAGGAGTTGCATCTCCAGAAATCAAAAGAAGATAGGCAAAGGGCTTTGCTGCAATTGCAGTGGAAAGTGATGAGTGACAAACCAAAAGAGGACCAAGAAGTGAATTCGAAACAGGCTCATCCTGTTTCATCAATTAAGAGGAGAAGTTCTCGTAGTGGCAAACTAAGTCAGCATGTCCTAGACTCTCCTTTCCTTGAAGTAACACAAACGCCAGTGTCAAAGTTGTTGCAGAAAGTGGAGAATGTAAAGGCAGGAAGTGTGATGAGCATTCCTAAGCATCACAGAAAGCAGGTAACTCACCATGAATATGAAGTTGAGACTTCTAATGGAAGAACAGTTACAAAGCGAAGAAAAACAAGAAGTACTGTTATGTTTGAGGACCCAAGAAAACATAAGACAAATACACCAAAAGCAAATACGCCTGGAAGTTTTGTTAAGGGCACAAAGGGAGGAGGCCATAATCATCCTTCAAatataggtgacttgttttcaGAAGGTTCACTAAATCCTTATGCAGATGACCCCTATGCATTTGATTAG 2607 0.3828 MQKLGFSSLKSLDKFKSLYGSASETAKTSSFSSRPSTDSISLGSFANLKLTAEKLVKEQASVKTDLEIANVKLKKSLEHVHALEEKLQNAFNENAKLKVKQKEDEKLWKGLESKLSSTKTLCDQLTETLQQLSNLVQAADKDKENLEKKLSTSSEALDSLNKNMDDLSLKLDSAEEIIRTCNKVIAELKFESQEKEKVHKDAQEKAANLLKEKDTMIKNLGETLAASTLTIESLNSKLGEINLQLEVKEDEIMHHKTTQEKLEKEKGDLQLCIAEITKKLDMSLRETKDLEELVQALAANLVQLDKESLNFLSKFDELNCLYASCFKLVQQERDAFSKHAQTRYDELHNKFLNLTSEKNAIQLINQDLNIDMTKLQKVLECTTAQNADDCRLAAERIQCLESEAQTLISRKADADTLISKLEEKVEILSDSSRSSENQMQGLLLKLSELETESKENTERLQEEILKKSEEIDSLKKEVIKREQHEDFLEKQVTQIHNVLEEKEQLILQYKEQEKKLEDQITENHSSLTAAECKLLEAKKQYDLMVENKQSELSRHLKEISQRNDQAINDIRRKYELEKMEIVNMEKDKVHKAIADIEGRCDQKLADCKEESRQQLMRIQEEHVTLVTQIQQEHDKKQLCLIAEHNEQLKHAQLQAENELREKTLFLRNEHEAQMKALRCELEDECQKLQEELHLQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQAHPVSSIKRRSSRSGKLSQHVLDSPFLEVTQTPVSKLLQKVENVKAGSVMSIPKHHRKQVTHHEYEVETSNGRTVTKRRKTRSTVMFEDPRKHKTNTPKANTPGSFVKGTKGGGHNHPSNIGDLFSEGSLNPYADDPYAFD 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0501 868 MobiDBLite consensus disorder prediction 786 823 - -
Sto5g0501 868 Coils Coil 495 522 - -
Sto5g0501 868 Coils Coil 418 477 - -
Sto5g0501 868 Coils Coil 287 307 - -
Sto5g0501 868 Coils Coil 641 661 - -
Sto5g0501 868 MobiDBLite consensus disorder prediction 780 868 - -
Sto5g0501 868 MobiDBLite consensus disorder prediction 715 745 - -
Sto5g0501 868 Coils Coil 185 219 - -
Sto5g0501 868 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 1 861 - -
Sto5g0501 868 Coils Coil 66 100 - -
Sto5g0501 868 Coils Coil 667 687 - -
Sto5g0501 868 PANTHER SYNAPTONEMAL COMPLEX PROTEIN 1-RELATED 1 861 - -
Sto5g0501 868 Coils Coil 567 587 - -
Sto5g0501 868 Coils Coil 231 265 - -
Sto5g0501 868 Coils Coil 122 177 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0501 - - lang:109359277 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0501 5 3184619 3191201 Sto5g0501 5 3184619 3191201 ECH