Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0498 ATGGATTTAACAGAAACCCATAGCTACAAATGCAAAGTGAACGTCACTCTTCGTTCTACTAAACCGGTTGTGGGATGCGAAATTAATCCGTTTGTGTCTGTCAGATCAGAAGGCCCGCTTCCAGCTCCGTCTCGCGATTATTCTGTCAGTTATAAGTGGTATAGGGAGCAAAAGTTCTGCTCCATACACCATGATAAGATGGCTACTTTTCAATGTGTATCTTGTGTTAAATTGAACATCACAAGGAAAGAGAGTTACCACTGCTCAACAAAGTGTTTCCTAAATTCATGGCAAGCACATATGTGGCGTCATCGTCTTAAAATGGAAACTTCAACTGATGATAAACAAACAATAAGAAAGCTTAGAAGTTGTGGCTCTTGGCCAGAGTTTGGTAGTGAATGTTTAAGTAATGAGAAAGCAGTagtgatggaagaagaaaaagaatggcTTTTAGTTAGTTGTTCAAAAAATTATGTACCAAAAATGGATGATCTTGGACTAACTTTGAAGCTGGAATGTGTAGCTGTTGACTTTTCATCAAATACTGCTTTATCAGACTTAAATGTGACTCTGACTGATCCTGTGATTGAATTCCCCACGGCTCAACCTCGCTGTATTGTTCAAATTCAATGTCCACGTGAATCTTCAAGTTTGTGTTCCACGTCCTTAAATGGTATTCATTTTAGCGTTCTCTCCTATAACATCCTGTCTGACTTGTACACTAATCAAAAGTATCACTACTGCCCATCATGGGCTCTTGTATGGGAATACCGTCGTCACAATTTGCTTCGTGAGATCATTGAATATAGTGCGGATATCATTTGTCTTCAGGAGGTACAGAGTGACCATTTTGAGAATTTCTTTAAACCTGAGTTGACAAAAGAAGGATATATGGTTGTATACAAGAAAAGAACCAATGAGGTTTACACTGGTAAGCAATTTGTAACTGATGGGTGTGCAACATTTTACCGGAATGATCTGTTTAAAGAAGTTGCGAAATATGAGattGAATTTAATAAGAAAACATCACCTGTGGTTGAAGCACTGAAATCTGAACTAAGGAATGAAGCTAGCATTCGCCTCAAGAAGGACAATATTGCACTTGTTGTTATTTTGGGAACTCCGAAGTATTGCCACACTTATAATGCCTTTCCGTCTAGAGTTTGTGTGGTAAATGCTCACATATGTTCAGATCCAAAATTCCCTGATGTAAAATTATTTCAGGTTGTAACCCTAATAAATGAACTAGAGAAAATTCTGCAACCAGAAATTCCTTTACTGATTTGTGGGGATTTCAACTCTGTTCCAAAAAGTGATCCTCACACTTTTATGGTTACTGGAAGACTAGAATATAGTGACTCTGTCGATCCATATGGTGTATATCAGCATCTAAAGCTTGATCATCAATTTTCTCTAGCAAGCGCATATGCAAGTTTTGGTCTAGCAGTTGGAAAGCAGGAGCGACATTTAGGGAAGTTTAACCTGAAAACCAGGGAGCCTATATTAACTTTCTTTTCACCAAGATTCTCAAAGACCTTAgattatattttctttacagAGTGCTTTCTGATAGTGAACAGTTTGGAGCTTGAAGGTGTATTGGAGCTTCTGGACAACAAAGATTTGGCAGCTGGTCTTCCCTCACCCCTTTGGTCATCAGATCATATCGCCCTCATGGCAACTTTCAGAATGCTTCCCAAAAATCACCCTGCAACTGCAAGAAAGCAAGCAGACCCTTCATAG 1743 0.3798 MDLTETHSYKCKVNVTLRSTKPVVGCEINPFVSVRSEGPLPAPSRDYSVSYKWYREQKFCSIHHDKMATFQCVSCVKLNITRKESYHCSTKCFLNSWQAHMWRHRLKMETSTDDKQTIRKLRSCGSWPEFGSECLSNEKAVVMEEEKEWLLVSCSKNYVPKMDDLGLTLKLECVAVDFSSNTALSDLNVTLTDPVIEFPTAQPRCIVQIQCPRESSSLCSTSLNGIHFSVLSYNILSDLYTNQKYHYCPSWALVWEYRRHNLLREIIEYSADIICLQEVQSDHFENFFKPELTKEGYMVVYKKRTNEVYTGKQFVTDGCATFYRNDLFKEVAKYEIEFNKKTSPVVEALKSELRNEASIRLKKDNIALVVILGTPKYCHTYNAFPSRVCVVNAHICSDPKFPDVKLFQVVTLINELEKILQPEIPLLICGDFNSVPKSDPHTFMVTGRLEYSDSVDPYGVYQHLKLDHQFSLASAYASFGLAVGKQERHLGKFNLKTREPILTFFSPRFSKTLDYIFFTECFLIVNSLELEGVLELLDNKDLAAGLPSPLWSSDHIALMATFRMLPKNHPATARKQADPS 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0498 580 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE ISOFORM X1 57 567 - -
Sto5g0498 580 SUPERFAMILY DNase I-like 220 567 IPR036691 -
Sto5g0498 580 Pfam Endonuclease/Exonuclease/phosphatase family 231 555 IPR005135 GO:0003824
Sto5g0498 580 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 57 567 - -
Sto5g0498 580 Gene3D Endonuclease/exonuclease/phosphatase 199 578 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0498 Sto-Chr5 3174265 3179835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0498 255 444 EF-hand Containing Proteins AT5G54130 25.628 1.46e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0498 K12603 - tcc:18592162 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0498 5 3174265 3179835 Sto5g0498 5 3174265 3179835 ECH