Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0483 ATGGACTCCATTATGACCAAGCTCCGTAATTTGGATGCCTACCCTAAAATCAACGAAGATTTCTACAGCCGTACCCTTTCCGGTGGCCTCATCACTATTGCATCCTCCATCCTCATGCTCTTGCTTTTCATATCTGAACTTCGTACGCCTCCTTCTACTCTGACTtccttcctttttattttttgtttcatttctcATTTCTGTCTCTCTGGAATGAATCTATGTTCAGGATTGTATCTTCATGCTGCGACTGAGACAAAGCTAGTTGTAGATACTTCTAGAGGAGAGACACTACGTATCAATGTAATGTCATTTGATTTGCTGTTGAAAGTGCAGTTTGATGTTACATTTCCTGCGCTACCTTGTTCTATACTCAGTCTGGATGCTATGGACATCAGCGGAGAGCAGCATCTAGATGTAAAACATGATATAGTCAAGAAAAGATTAGACTCCCATGGGAATGTAATAGAAACAAGGCAGGATGGGATTGGTTCTCCCAAGATTGAAAAGCCTTTGCAAAGACATGGAGGCAGGCTTGAGCACAATGAAACATATTGTGGTTCCTGTTATGGTGCAGAAGCGACAGATGAGGATTGTTGTAATTCCTGTGAGGACGTTCGTGAAGCTTACCGGAAAAAAGGATGGGCGATATCAAATCCAGATGTAATTGATCAGTGCAAGAGAGAAGGATTCTTACAAAGGATCAAggatgaagaaggagaagggtgTAATGTCTATGGATTCTTGGAAGTAAATAAAGTGGCTGGGAATTTCCATTTTGCTCCAGGGAAGAGCTTTCAGCAATCTGGTGTCCATGTGCATGACCTGCTGGCTTTCCAAAAGGACTCTTTCAACATAAGCCACCATATTAACAGATTAGCTTTTGGAGATTATTTCCCTGGTGTTGTGAATCCTCTTGATGGTGTGCATTGGACACAGCAAGCACCAAGTGGGATGTATCAGTACTTTATAAAGGTTGTGCCTACTGTATACACTGATGTCAACGGACACACAATCCAGTCAAACCAGTTTTCTGTGACAGAACACTTTAGGACCGGAGATGTGGGTCGGCTTCTGTCCCTTCCtggagttttcttcttctatgACCTTTCCCCAATTAAGGTTACCTTTACGGAAGAACATATCTCATTCTTACACTTCCTTACTAACGTGTGTGCCATAGTTGGAGGTGTTTTCACTGTTTCTGGAATCTTAGATTCATTTGTCTACCATGGTCAAAAGGCAATCAAGAAGAAGATGGAACTCGGCAAATTTAGCTGA 1281 0.3997 MDSIMTKLRNLDAYPKINEDFYSRTLSGGLITIASSILMLLLFISELRTPPSTLTSFLFIFCFISHFCLSGMNLCSGLYLHAATETKLVVDTSRGETLRINVMSFDLLLKVQFDVTFPALPCSILSLDAMDISGEQHLDVKHDIVKKRLDSHGNVIETRQDGIGSPKIEKPLQRHGGRLEHNETYCGSCYGAEATDEDCCNSCEDVREAYRKKGWAISNPDVIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQKDSFNISHHINRLAFGDYFPGVVNPLDGVHWTQQAPSGMYQYFIKVVPTVYTDVNGHTIQSNQFSVTEHFRTGDVGRLLSLPGVFFFYDLSPIKVTFTEEHISFLHFLTNVCAIVGGVFTVSGILDSFVYHGQKAIKKKMELGKFS 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0483 426 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 137 IPR039542 -
Sto5g0483 426 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 2 49 - -
Sto5g0483 426 PANTHER ENDOPLASMIC RETICULUM VESICLE TRANSPORTER PROTEIN 77 425 - -
Sto5g0483 426 Pfam Endoplasmic reticulum vesicle transporter 189 406 IPR012936 -
Sto5g0483 426 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 2 49 IPR045888 -
Sto5g0483 426 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 77 425 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0483 Sto-Chr5 3065674 3071571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0483 K20367 - gmx:100782309 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0483 5 3065674 3071571 Sto5g0483 5 3065674 3071571 ECH