Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0475 ATGGCTGGCATTGAGGGTAGGAATGGGTACAAAAATGGTGTACTACCAAATAGGTACCCTGCAGCAATATCTGAAGTAGACGAGTTCTGCCGCTCCCTTGGGGGAAAGAAGCCAATACACAGCATATTGATTGCAAACAATGGAATGGCAGCTGTCAAGTTTATACGCAGCGTTAGAACCTGGGCCTATGAGACTTTTGGCACGGAGAAGGCTATCCTGTTGGTGGCCATGGCTACTCCAGAGGACATGAGAATCAATGCTGAACACATCAGAATGGCTGATCAATTTGTGGAAGTACCTGGCGGAACCAATAACAATAACTATGCCAATGTGCAGCTTATTGTAGAGATGGCCGAGATAACTCGTGTTGACGCAGTGTGGCCTGGTTGGGGTCATGCATCAGAAAATCCTGAGCTTCCAGATGCACTAAATGCAAAAGGAATCATATTTCTTGGACCTCCTTCCACATCTATGGCTGCTTTGGGAGATAAAATTGGTTCGTCATTGATTGCTCAAGCAGCAGATGTGCCAACCCTTCCATGGAGTGGTTCTCATGTGAAAATTCCACCCGAGAGTAGCTTGGTTACTATTCCTGATGACATTTACCAAAAAGCATGTGTATATACAACAGAGGAAGCTATAGCAAGTTGTCAAGTTGTCGGTTACCCTGCTATGATCAAAGCATCTTGGGGTGGGGGTGGTAAAGGCATAAGAAAGGTTCATAATGATGACGAGGTCAGGGCATTATTCAAGCAAGTTCAAGGTGAAGTTCCGGGCTCGCCTATATTTATAATGAAGGTTGCATCTCAGAGTCGGCATTTAGAAGTCCAGTTGCTTTGCGATCAGTATGGAAATGTTGCAGCTTTGCATAGTCGTGATTGTAGTGTGCAAAGGAGGCACCAAAAGATTATTGAGGAGGGACCAATCACTGTAGCTCCTTGGGAGACGGTGAAAAAACTGGAACAAGCAGCTAGGAGATTGGCTAAAAGTGTAAATTATGTTGGGGCAGCTACTGTTGAGTATTTATACAGTATGGACACTGGCGAGTACTACTTTTTAGAGCTGAATCCGAGGCTACAGGTTGAACACCCTGTTACTGAGTGGATAGCAGAGGTAAATCTACCAGCAGCACAAGTTTCCGTTGGGATGGGTATCCCTCTCTGGCAAATTCCTGAGATAAGGCGTTTCTATGGGGTAGAACATGGTGCGGGATATAATGCTTGGAGGAAAACATCAGTTTTAGCTACCCCTTTTGATTTTGACAAAGCAGAATCTACAAGGCCTAAAGGTCATTGTGTGGCTGTGCGAGTGACAAGTGAGGATCCTGATGATGGTTTTAAGCCCACTAGTGGGAAAGTGCAGGAACTGAGCTTCAAAAGCAAGCCAAATGTGTGGGCATACTTCTCTGTTAAGTCTGGGGGAGGAATTCATGAATTCTCAGATTCTCAGTTTGGGCATGTTTTTGCATTTGGAGAATCTAGGGCTTTAGCTATTGCAAACATGGTTCTGGGGCTTAAAGAGGTTCAAATTCGGGGAGAAATTCGCACCAACGTGGACTATACCATTGATCTTTTAAATGCTTCAGACTACAGAGAAAACAAAATTCATACAGGATGGTTAGACAGTAGAATTGCTATGCGGGTTAGAGCAGAAAGGCCTCCTTGGTATATTTCTGTTGTTGGAGGGGCACTTTATAAAGCTTCTACTAGTAGTATGGCTCTGGTTTCAGACTATATTGGCTATCTTGAAAAAGGACAAATCCCTCCCAAGCACATATCTCTTGTCCATTCACAAGTATCCTTGAACATTGAAGGAAGCAAATACACGATTAACATGGTAAGAGGAGGGTCAGGAAGttataaattgaaaatgaatCAATCAGAGATAGAAGCAGAGATACATACTTTACGTGATGGAGGTCTATTAATGCAGGCAAGCTTCTACTACCCACAGTTGGATGGAAACAGTCATGTGATATATGCAGAGGAAGAAGCAGCTGGAACTCGCCTTCTAATAGATGGAAGGACTTGCTTGCTTCAGAATGATCATGATCCATCAAAGTTAGTTGCGGAGACACCATGCAAGCTTCTGAGATATTTGGTAACGAATGATAGTCATATTGATGCCGATGCACCATATGCTGAAGTTGAGGTCATGAAAATGTGTATGCCTCTTCTTTCACCGGCTTCTGGggttattcattttaaaatgtCTGAAGGCCAACCAATGCAGGCTGGGGAGCTTATAGCAAGGCTTGATCTAGATGATCCTTCAGCTGTAAGAAAAGCAGAACCCTTCCATGGGGGCTTCCCAGTCTTGGGCCCTCCTACTGCAATTTCTGGTAAAGTTCATCAGAAATGTGCTACAAGTTTAAATGCAGCTCGGATGATTCTAGCTGGTTACGAGCACAAAATTGAAGAAGTTGTACAAAGTTTGCTTAATTGCCTAGATAGTCCTGAATTGCCTTTCCTCCAATGGCAAGAGTGCTTCGCCGTTCTGGCTAACCGTCTTCCCAAAGATCTAAAAAATTTGTTGGAATCAAAATATAAGGAGTGCGAGAGGATTTCAAGCTTCCAAAATATCGATTTTCCTGCCAAATTATTGAAAGGAATCCTTGAAGCTTATCTTTCCTCCTGTCCCGACAAAGAAAAAGGATCACAAGAAAGGCTTGTTGAACCTCTGATGAATCTAGTGAAGTCTTATGAAGGTGGAAGAGAGAGCCACGCCCGCATAATTGTTCAATCCCTTTTTGAAGAATATCTTTCTGTTGAAGAACTATTTAGTGATAATATACAGGCTGATGTAATAGAACGTCTCCGACTTCAATATAAGAAGGATCTACTGAAGGTCGTGGATATAGTGCTATCTCATCAGGGGgtgaagaataaaaataagcTGATACTTCAACTAATGGAACAATTGGTATACCCTAACCCTGCTGCCTACAGGGATCAATTGATCCGTTTCTCGGCACTCAACCATACAAATTATTCTGAGTTGGCACTTAAGGCAAGTCAACTATTAGAACAAACTAAATTGAGTGAACTTAGGTCCAGCATCGCTAGGAGTCTTTCTGAACTAGAGATGTTCACTGAGGATGGTGAAAAAATTGACACTCCCAAAAGAAAGAGTGCCATAAATGACCGAATGGAGGACATTGTGAACGCTTCTTTGGCCGTTGAAGATGCCCTTGTGGGTTTGTTTGATCACAGTGATCACACCCTTCAAAGGCGGGTTCTGGAAACTTATATTCGCAGGCTGTACCAGCCATATCTTGTCAAAGGGAGTGTCAGGATGCAGTGGCACAGATCTGGTCTTATTGCTTCATGGGAGTTTTTGGAAGAGTATGTTGAAAGAAAGAGTGGAACTGGAGACCAAAAGTACAATGGAACACCAGTAGAAAAACATGGTGAGACGAAATGGGGAGCTATGGTTATAATAAAATCTCTTCAATTTTTGCCTGCAACTATCAGTGCTGCATTAAAGGAAGCTACTCATAACTTTCACAAAACACGTCCTGATGTTTCTGCTGAACTAGTTAACCATGGTAATATGATGCATATAGCATTGGTAGGCATCAACAATCAGATGAGTTTACTACAGGACAGTGGGGATGAGGACCAGGCTCAAGAAAGGACTAATAAGttaattaaaatactaaaagaGCGAGAAGTAGGCTCAACTATACATGCTGCAGGTGTTGGAGTAATAAGTTGTATCATACAGAGGGATGAAGGCCGAACCCCTATGAGACATTCCTTTCATTGGTCTGCAGAAAAGTTCTGTTATGAGGAGGAGCCTCTGTTGCGTCATGTGGAACCTCCACTATCTATTTATCTTGAATTGGACAAACTTAAAGGATATGAGAATATACATTATACCCCGTCCCGAGATCATCAATGGCACTTGTACACAGTTGTAGATACCAAGCCTCAATCAATTCAAAGAATGTTTCTTCGAACACTTGTGAGACAACCAACGACAGATGGAGGGTTCTCATATCAAGGGCTAGATGTGGAAACACTGCGTACCCAGAAGGCCATGTCTCTTACTTCAAGGAGCATTTTGAGATCCTTGATGGCTGCAATGGAGGAATTGGAACTTAATGCACACAATGCCACTGTCCGATCTGAACATGTTCATATGTACCTCTATATCATACGTGAGCAACAAATAGATGATCTGTTGCCTTATACCAAGAGAATAAACCTAGATGCTGGTCAAGAAGCAGCAACAATTGAGTCAATCTTAAAAGAATTGGCACATGAAATCCATTCATCTGTTGGCGTAAGAATGCATAAATTGGGTGTTGTAGAGTGGGAAGTCAAGCTGTGGATGGCATCCTCTGGACCGGCAAATGGTGCTTGGAGGGTCATTGTAACAAATGTGACTGGTCATACTTGCCTTGTACATATATACAGAGAAGTGGAAGACGCAAGCAGTCAAAAAGTTGTATATAGATCCTTCACCGAAAAGGCTCCTCTACATGATGTACCAGTTAATGAAAACTATAAACCTTTGGCAGTTATTGACCGAAAACGTCTTTCAGCAAGGAAGAACAACACCACATATTGCTATGATTTTCCACTGGCATTTGAAACAGCCTTGGAACAGTCGTGGGAAATTCAATACCCTGGATTTCAGAAAGCCAAAGATGAAGTTCTTCTGAAAGTAACAGAGCTTAAATTTGCTGACAAAGAAGGTAGTTGGGGTACTCAACTTGTTCCTGTGGAGCGTCCACCTGGACTTAATGATGTTGGTATGGTAGCTTGGTTTATGGAAATGCGCACACCTGAATTTCCATCTGGAAGGACAATATTGATTGTAGCAAATGATGTGACCTTCAAGGCTGGTTCTTTTGGACCAAGAGAGGATGCATTTTTCCATGCAGTAACTGATCTTGCATGTACGAAAAAAATACCTTTAATTTATCTAGCAGCAAATTCTGGTGCCCGCTTAGGTGTAGCAGAGGAAGTGAAGGCCTGTTTTAGAGTTGGTTGGTCTGATGAATCTAATCCTGATCATGGTTTTCAGTACGTTTATTTAACACCAGAGGATTATGCTCAGATTGGATCATCGGTGATAGCACACGAGTTAAAGCTGGAAAGTGGAGAAACCAGATGGGTTATAGATACCATTGTTGGGAAAGAGGATGGTCTGGGAGTTGAGAACTTGAGTGGTAGTGGGGCCATTGCTGGTGCCTATTCAAGGGCATACAAGGAAACTTTTACATTGACATACGTGACTGGAAGGACTGTTGGAATTGGGGCTTATCTTGCCAGGCTTGGGATGAGATGCATACAAAGGCTTGATCAGCCTATAATTCTTACTGGTTTTTCTGCGTTAAACAAACTTCTTGGCCGCGAGGTTTACAGCTCTCACATGCAACTTGGCGGGCCTAAAATCATGGCAACTAATGGAGTAGTTCATCTTACAGTTTCAGATGATCTTGAAGGTGTTTCTGCTATTTTGAAGTGGCTTAGCTACATTCCTTCTCATGTAGGCGGTACACTTCCCATCGTACAACCCCTAGATCCTCCAGAAAGGCCTGTGGAGTATTTCCCTGAAAACTCATGTGATCCTCGGGCTGCTATTTGCGGTGCTCTGGATGGTAATGGAAAATGGGAGGGAGGTATATTTGACAAGGACAGCTTTGTGGAAACACTTGATGGCTGGGCAAGGACAGTTGTTACAGGAAGGGCAAAGCTTGGAGGAATCCCTGTGGGAATTGTCGCAGTTGAAACACAGACAGTGATGCAAGTAATACCGGCGGATCCGGGCCAGCTTGATTCTCATGAAAGGGTGGTTCCTCAGGCAGGGCAAGTCTGGTTTCCTGATTCTGCAACAAAGACAGCACAAGCAATATTGGATTTCAACAGAGAAGAGCTCCCACTATTCATTCTTGCAAATTGGAGAGGGTTTTCCGGTGGGCAGAGGGACCTTTTTGAAGGAATTCTTCAGGCTGGATCAACCATTGTGGAGAACCTTAGAACATACAAGCAGCCCATATTTGTATATCTCCCAATGATGAGTGAGCTCCGCGGTGGGGCGTGGGTTGTGGTGGATAGCCGAATCAATTCAGACCACATTGAAATGTACGCTGATGAAACAGCCAAGGGTAATGTCCTTGAGCCGGAAGGCATGATTGAGATCAAATTTAGGACAAAGGAATTGTTGGAGTGCATGGGTAGACTTGATCAAAAGCTGATAAAACTCAAGGCAAAACTTCAGGATGCCAAGAGTAGTGGGGCCCTTGGCACTATTGAATCCCTACAGCAGCAGATCAAATGCCGTGAGAAACAACTTTTACCTGTGTACACCCAGATAGCTACCAAATTTGCTGAACTGCACGACACGTCCTTAAGAATGGCAGCAAAGGGGGTAATAAGACAAGTTCTGGAGTGGCGAAAGTCCCGTTCTTTCTTCTACCGGAGACTGCATAGGAGAGTTGGTGAGCATACACTGATCAACAGTGTGAGAGACGCAGCTGGTGATCATCTGTCTCATGTATCAGCAATGAACTTCATCAAAAACTGGTATTTGAATTCTGATATTGCCAAAGGCAGAGGAGACGCTTGGTTGGATGATGAAGCTTTCTTCAGATGGAAGGACGAGCCCGGTAATTACGAGGATAAGTTAAAGGAATTGAGGGTACAGAAGCTGTTGCTTCAAATGACTAGTATTGGTGACTCAGTTTTGGAATTGCAAGCCTTACCTCGAGGTTTTTCTGCTCTTTTAGACAAGTTGGAGCCATCAAGGCGTGAGAAATTGATTGAGGAACTTCGTAAGGTACTTGGTTAA 6801 0.4301 MAGIEGRNGYKNGVLPNRYPAAISEVDEFCRSLGGKKPIHSILIANNGMAAVKFIRSVRTWAYETFGTEKAILLVAMATPEDMRINAEHIRMADQFVEVPGGTNNNNYANVQLIVEMAEITRVDAVWPGWGHASENPELPDALNAKGIIFLGPPSTSMAALGDKIGSSLIAQAADVPTLPWSGSHVKIPPESSLVTIPDDIYQKACVYTTEEAIASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRALFKQVQGEVPGSPIFIMKVASQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPITVAPWETVKKLEQAARRLAKSVNYVGAATVEYLYSMDTGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVSVGMGIPLWQIPEIRRFYGVEHGAGYNAWRKTSVLATPFDFDKAESTRPKGHCVAVRVTSEDPDDGFKPTSGKVQELSFKSKPNVWAYFSVKSGGGIHEFSDSQFGHVFAFGESRALAIANMVLGLKEVQIRGEIRTNVDYTIDLLNASDYRENKIHTGWLDSRIAMRVRAERPPWYISVVGGALYKASTSSMALVSDYIGYLEKGQIPPKHISLVHSQVSLNIEGSKYTINMVRGGSGSYKLKMNQSEIEAEIHTLRDGGLLMQASFYYPQLDGNSHVIYAEEEAAGTRLLIDGRTCLLQNDHDPSKLVAETPCKLLRYLVTNDSHIDADAPYAEVEVMKMCMPLLSPASGVIHFKMSEGQPMQAGELIARLDLDDPSAVRKAEPFHGGFPVLGPPTAISGKVHQKCATSLNAARMILAGYEHKIEEVVQSLLNCLDSPELPFLQWQECFAVLANRLPKDLKNLLESKYKECERISSFQNIDFPAKLLKGILEAYLSSCPDKEKGSQERLVEPLMNLVKSYEGGRESHARIIVQSLFEEYLSVEELFSDNIQADVIERLRLQYKKDLLKVVDIVLSHQGVKNKNKLILQLMEQLVYPNPAAYRDQLIRFSALNHTNYSELALKASQLLEQTKLSELRSSIARSLSELEMFTEDGEKIDTPKRKSAINDRMEDIVNASLAVEDALVGLFDHSDHTLQRRVLETYIRRLYQPYLVKGSVRMQWHRSGLIASWEFLEEYVERKSGTGDQKYNGTPVEKHGETKWGAMVIIKSLQFLPATISAALKEATHNFHKTRPDVSAELVNHGNMMHIALVGINNQMSLLQDSGDEDQAQERTNKLIKILKEREVGSTIHAAGVGVISCIIQRDEGRTPMRHSFHWSAEKFCYEEEPLLRHVEPPLSIYLELDKLKGYENIHYTPSRDHQWHLYTVVDTKPQSIQRMFLRTLVRQPTTDGGFSYQGLDVETLRTQKAMSLTSRSILRSLMAAMEELELNAHNATVRSEHVHMYLYIIREQQIDDLLPYTKRINLDAGQEAATIESILKELAHEIHSSVGVRMHKLGVVEWEVKLWMASSGPANGAWRVIVTNVTGHTCLVHIYREVEDASSQKVVYRSFTEKAPLHDVPVNENYKPLAVIDRKRLSARKNNTTYCYDFPLAFETALEQSWEIQYPGFQKAKDEVLLKVTELKFADKEGSWGTQLVPVERPPGLNDVGMVAWFMEMRTPEFPSGRTILIVANDVTFKAGSFGPREDAFFHAVTDLACTKKIPLIYLAANSGARLGVAEEVKACFRVGWSDESNPDHGFQYVYLTPEDYAQIGSSVIAHELKLESGETRWVIDTIVGKEDGLGVENLSGSGAIAGAYSRAYKETFTLTYVTGRTVGIGAYLARLGMRCIQRLDQPIILTGFSALNKLLGREVYSSHMQLGGPKIMATNGVVHLTVSDDLEGVSAILKWLSYIPSHVGGTLPIVQPLDPPERPVEYFPENSCDPRAAICGALDGNGKWEGGIFDKDSFVETLDGWARTVVTGRAKLGGIPVGIVAVETQTVMQVIPADPGQLDSHERVVPQAGQVWFPDSATKTAQAILDFNREELPLFILANWRGFSGGQRDLFEGILQAGSTIVENLRTYKQPIFVYLPMMSELRGGAWVVVDSRINSDHIEMYADETAKGNVLEPEGMIEIKFRTKELLECMGRLDQKLIKLKAKLQDAKSSGALGTIESLQQQIKCREKQLLPVYTQIATKFAELHDTSLRMAAKGVIRQVLEWRKSRSFFYRRLHRRVGEHTLINSVRDAAGDHLSHVSAMNFIKNWYLNSDIAKGRGDAWLDDEAFFRWKDEPGNYEDKLKELRVQKLLLQMTSIGDSVLELQALPRGFSALLDKLEPSRREKLIEELRKVLG 2266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0475 2266 SMART Biotin_carb_C_2 434 541 IPR005482 -
Sto5g0475 2266 Pfam Biotin-requiring enzyme 687 752 IPR000089 -
Sto5g0475 2266 SUPERFAMILY ClpP/crotonase 1503 1832 IPR029045 -
Sto5g0475 2266 Pfam Carbamoyl-phosphate synthase L chain, ATP binding domain 206 388 IPR005479 GO:0005524
Sto5g0475 2266 Pfam Carboxyl transferase domain 1598 2149 IPR034733 -
Sto5g0475 2266 Pfam Biotin carboxylase C-terminal domain 435 541 IPR005482 -
Sto5g0475 2266 SUPERFAMILY ClpP/crotonase 1837 2225 IPR029045 -
Sto5g0475 2266 SUPERFAMILY PreATP-grasp domain 19 161 IPR016185 -
Sto5g0475 2266 SUPERFAMILY Single hybrid motif 685 755 IPR011053 -
Sto5g0475 2266 CDD biotinyl_domain 688 752 - -
Sto5g0475 2266 Gene3D - 269 527 - -
Sto5g0475 2266 ProSiteProfiles Biotinyl/lipoyl domain profile. 679 753 IPR000089 -
Sto5g0475 2266 Coils Coil 1356 1376 - -
Sto5g0475 2266 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 162 400 - -
Sto5g0475 2266 Gene3D - 206 268 IPR013815 GO:0005524
Sto5g0475 2266 Gene3D - 164 205 - -
Sto5g0475 2266 ProSiteProfiles Biotin carboxylation domain profile. 38 545 IPR011764 -
Sto5g0475 2266 Gene3D Biotin dependent carboxylase carboxyltransferase 1654 1718 - -
Sto5g0475 2266 Gene3D - 12 163 - -
Sto5g0475 2266 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile. 1846 2161 IPR011763 GO:0016874
Sto5g0475 2266 ProSitePatterns Carbamoyl-phosphate synthase subdomain signature 2. 352 359 IPR005479 GO:0005524
Sto5g0475 2266 PANTHER BNAC06G01580D PROTEIN 22 2265 - -
Sto5g0475 2266 SUPERFAMILY Rudiment single hybrid motif 429 542 IPR011054 -
Sto5g0475 2266 Pfam Biotin carboxylase, N-terminal domain 39 158 IPR005481 -
Sto5g0475 2266 ProSiteProfiles Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile. 1503 1842 IPR011762 -
Sto5g0475 2266 Gene3D - 683 754 - -
Sto5g0475 2266 Gene3D - 1504 1831 - -
Sto5g0475 2266 PANTHER ACETYL-COA CARBOXYLASE, ISOFORM A 22 2265 - -
Sto5g0475 2266 Coils Coil 2062 2082 - -
Sto5g0475 2266 ProSiteProfiles ATP-grasp fold profile. 191 383 IPR011761 GO:0005524|GO:0046872
Sto5g0475 2266 Gene3D - 1836 2235 - -
Sto5g0475 2266 Pfam Acetyl-CoA carboxylase, central region 753 1496 IPR013537 GO:0003989|GO:0005524|GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0475 Sto-Chr5 3006014 3017674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0475 8 2266 Acyl Lipid Metabolism Gene Families AT1G36160 80.557 0.0 3814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0475 K11262 - gmx:100778658 4035.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0475 5 3006014 3017674 Sto5g0475 5 3006014 3017674 ECH