Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0464 ATGGGTTCTTTTTTGAGTATGGCTAGTAGTAGTATCAAGCATGCTAGAAGTGAGGATGATGAGGTCTTTCAGAATGAGATCTGTAAGAGGCGAAGAATGTCATCTGGCTTTGATGAGGAGAGTCCAAGATTAATTCCAAATCTCCCTGATGAGTTATCACTTCAGATTATTGCTAGACTTCCTAGGATTTGCTACTTCAATATTAGGTTGGTGTCACGGAAGTGGAAGGCTACTGTCACAAGTTCTGAGCTATACAGATTAAGAAAAGAACTTGGAACAACTGAAGAGTGGCTATATCTGTTGATCAAGGTTGGAGAAAGTAAGCTTCTGTGGCATGCGTTAGACCCCCGTTCTCGGAGATGGCAGAGACTTCCTGCTATGCCTAATTTTGTTAATGAAGAAGAATCTAGAAAGGGTTCTTCCAGGCTTTGGATGTGGAACATGGTGGAAGGTATTAGGATTGCTGAAGTTATTAGGGGTTTGCTGGGACAAAAGGATGCATTAGATGAGATGCCCTTTTGTGGTTGTGCCATCGGAGCAGTAGATGGATGTCTCTACGTTCTGGGTGGATTCTCTAAAGCTTCCACTATGAGATGTGTGTGGCGGTTTGATCCAATACAAAACACATGGAGCAAGGTGACTTCTATGTCTACAGGTAGGGCATACTGTAAGACAGGCATATTAAATAACAAGCTTTATGTTGTTGGAGGAGTTAGCCAGGGTCAAGCTGGACTGATTCCTCTTCAATCTGCTGAAGTTTTTGACCCCTCTACAGATACATGGTCCAATGTACCTAGTATGCCTTTCTCAAGAGCTCGAGTCCTGCCCACTGCTTTTTTAGCTGACATGTTAAAGCCTATTGCTACAGGATTGACCTCATACATGGGAAGGTTATGTGTCCCACAAAGTTTGTATTCATGGCCCTTTTTTGTTGATGTTGGTGGAGAAATCTATGATCCTGAAACAAATTCATGGATGGAAATGCCTGCTGGAATGGGTGAGGGTTGGCCGGCTCGGCAGGCAGGTACTAAGTTGAGTGTGGTGGTGGATGGTGAGTTATATGCTTTTGATCCTTCCAATTCTCTGGATAGTGGGAAGATCAAGGTATATGATCAAGGAGAAGATGCATGGAAAGTAGTTATTGGAAAAGTGCCTATATATGATTCAGCAGATTCAGAGTCTCCATATTTACTTGCTGGTTTCCATGGGAAGCTACATGTCATCACTAAAGATGCCAACCATGATATTGCTGTTCTGCAGGCTGACCTGCGCAACTCAACAACACCTCTTCCACCACTCTCTTTTCATGAATTTCCAGAACAAGCAGTTGCTGAATCAGATGCAGTTGTTTGGAAGGTAGTCGCCAACAGAGATTATGGGCCAGCTGAATTGGTGAGTTGCCAAGTCATTGATATTTAG 1419 0.432 MGSFLSMASSSIKHARSEDDEVFQNEICKRRRMSSGFDEESPRLIPNLPDELSLQIIARLPRICYFNIRLVSRKWKATVTSSELYRLRKELGTTEEWLYLLIKVGESKLLWHALDPRSRRWQRLPAMPNFVNEEESRKGSSRLWMWNMVEGIRIAEVIRGLLGQKDALDEMPFCGCAIGAVDGCLYVLGGFSKASTMRCVWRFDPIQNTWSKVTSMSTGRAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSNVPSMPFSRARVLPTAFLADMLKPIATGLTSYMGRLCVPQSLYSWPFFVDVGGEIYDPETNSWMEMPAGMGEGWPARQAGTKLSVVVDGELYAFDPSNSLDSGKIKVYDQGEDAWKVVIGKVPIYDSADSESPYLLAGFHGKLHVITKDANHDIAVLQADLRNSTTPLPPLSFHEFPEQAVAESDAVVWKVVANRDYGPAELVSCQVIDI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0464 472 Gene3D - 43 98 - -
Sto5g0464 472 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 4 472 - -
Sto5g0464 472 SMART kelc_smart 184 230 IPR006652 GO:0005515
Sto5g0464 472 SMART kelc_smart 231 281 IPR006652 GO:0005515
Sto5g0464 472 SUPERFAMILY F-box domain 41 111 IPR036047 GO:0005515
Sto5g0464 472 Gene3D - 110 387 IPR015915 GO:0005515
Sto5g0464 472 SUPERFAMILY Kelch motif 105 408 IPR015915 GO:0005515
Sto5g0464 472 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 472 - -
Sto5g0464 472 Pfam Kelch motif 220 268 IPR006652 GO:0005515
Sto5g0464 472 Pfam Kelch motif 172 217 IPR006652 GO:0005515
Sto5g0464 472 ProSiteProfiles F-box domain profile. 42 88 IPR001810 GO:0005515
Sto5g0464 472 Pfam F-box domain 46 86 IPR001810 GO:0005515
Sto5g0464 472 SMART fbox_2 48 88 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0464 Sto-Chr5 2913965 2915413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0464 38 266 Miscellaneous Gene Families AT4G33900 25.000 1.24e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0464 - - gmx:100806691 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0464 5 2913965 2915413 Sto5g0464 5 2913965 2915413 ECH