Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0461 atgcCTCATCAAGTTTCATCTTGTATTTCCATACCTCATGCAGTTTCACCTCAACCTACTACAACTTATACCAGTTGGAAGTCTTTCAGAGAGAAGAAAGCAGATTATCAGACAGGAATTCCTCGCAGTGTGAATATGGAGAATCTGCAGAATGAATATTTATTTCCTGAGATATTCATGCGAGAGTCTGAACATGCTAAGAAGAATCCAGACGCCAAGATAATCAGACTTGGTATTGGTGATACCACTGAGCCAATACCGGGTATCATAACCTCTGCTATGGTTGAGAAAGCACTTGCTCTATCAACAGTTGAAGGTTACAGGGGATATGGACCAGAGCAAGGAATTGGGGCTCTAAGGAAGGCAATAGCTGAAAGATTTTACAAAGATTCacaaataaaggaaaatgaGATTTTTGTATCGGACGGTGCACAGTGCGACATCTCACGCGTTCAGATGCTTCTAGCACCTACTTTGTCAGTGGCCGTACAGGACCCGACTTTTCCAGCGTATGTGGACTCGAGTGTGATTCTTGGTAGAGCTGGAAGGTATCAAGCAGAAAGTAACAAGTACAGAAACATTGTGTACATGAAGTGTGTGCCTGAGAATAATTTTTTCCCAGACTTATCTGTCACTCCCAGAGCTGATGTCATTTTCTTCTGTTCTCCTAACAATCCCACTGGTAATGCTGCCACGCGGCAGCAGCTGAAGCAGCTTGTGGATTTTGCAAAAGCAAATGGATCCATCATCATCTATGACACTGCTTATGCTACTTACATATCCGATGATAGCCCAAGATCAATCTTTGAAATCCCCGGAGCCAAACAGGTCGCAATTGAAATTTCATCATTCTCCAAATTTGCTGGTTTCACTGGGGTCCGCCTTGGGTGGACTGTTGTGCCTCAAGAACTTTTGTACTCTGATGGATATCCTGTGATAAAGGATTATAATCGCATAGTTTGTACGTGCTTCAATGGTGCATCAAATGTTGTTCAAGCTGGAGGACTTGCTTGCCTTTCTGAAGAAGGTTTTAAGGCGCTAAATAGGACTATTGGGTACTACAGGGAGAATGCCAAGATTCTAGTGGACACCTTCTCATCACTTGGTCTGAAGGTGTATGGTGGTAGAAATGCACCTTACGTATGGGTGCATTTTCCTGGGATGAAATCATGGGATGTGTTCAACAAAATTCTTGAGACAACTGACATAGTCACCGTCCCAGGAATAGGATTTGGTCCTGGCGGCGAGGAGTTTATTAGGTTGGTAGAGATGGCGTTGGCAGGACATGGTATTGCTGAAGCATACGTGATGAAGAAGCTATATAAGCAGAAAATGGAGGAgcaagagaaaaaggaaagaatcaaGATGGGTAGCGATAGCAGTGGTTCTGAGGTGCAAAGCTCTAGTGGATGCTTCCCCTGCTTTTCAAAGACTCACCAGAGAACAAGTTCACGGATTAAAGATTACAGAGAAAAGCAAGATGGGACAGCTCGGGATACTCATGTCTga 1509 0.4254 MPHQVSSCISIPHAVSPQPTTTYTSWKSFREKKADYQTGIPRSVNMENLQNEYLFPEIFMRESEHAKKNPDAKIIRLGIGDTTEPIPGIITSAMVEKALALSTVEGYRGYGPEQGIGALRKAIAERFYKDSQIKENEIFVSDGAQCDISRVQMLLAPTLSVAVQDPTFPAYVDSSVILGRAGRYQAESNKYRNIVYMKCVPENNFFPDLSVTPRADVIFFCSPNNPTGNAATRQQLKQLVDFAKANGSIIIYDTAYATYISDDSPRSIFEIPGAKQVAIEISSFSKFAGFTGVRLGWTVVPQELLYSDGYPVIKDYNRIVCTCFNGASNVVQAGGLACLSEEGFKALNRTIGYYRENAKILVDTFSSLGLKVYGGRNAPYVWVHFPGMKSWDVFNKILETTDIVTVPGIGFGPGGEEFIRLVEMALAGHGIAEAYVMKKLYKQKMEEQEKKERIKMGSDSSGSEVQSSSGCFPCFSKTHQRTSSRIKDYREKQDGTARDTHV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0461 502 Coils Coil 431 451 - -
Sto5g0461 502 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC-RELATED 18 427 - -
Sto5g0461 502 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 43 425 IPR019942 GO:0008483
Sto5g0461 502 MobiDBLite consensus disorder prediction 451 502 - -
Sto5g0461 502 Pfam Aminotransferase class I and II 74 421 IPR004839 GO:0009058|GO:0030170
Sto5g0461 502 Gene3D - 84 341 IPR015421 GO:0003824
Sto5g0461 502 MobiDBLite consensus disorder prediction 481 502 - -
Sto5g0461 502 PANTHER AMINOTRANSFERASE 18 427 IPR019942 GO:0008483
Sto5g0461 502 SUPERFAMILY PLP-dependent transferases 52 421 IPR015424 -
Sto5g0461 502 Gene3D Aspartate Aminotransferase, domain 1 54 422 IPR015422 GO:0003824
Sto5g0461 502 CDD AAT_like 75 442 - -
Sto5g0461 502 MobiDBLite consensus disorder prediction 459 480 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0461 K10206 - qsu:112023739 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0461 5 2890326 2893614 Sto5g0461 5 2890326 2893614 ECH